Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04227 ATGATCAACAAGACAATTCTGTGGAGCGAGGGCCAAATTTCTGGCCGTGTCTCCGAGCTCGCCGCCAAATCCGACTTGGTAGGTTCTTCACCAGCCCCCATAGTCGTCGGTGTGGCCATTGGTGCCTTCCTCTTCGTGGCAGATCTTGTTCGCAAGATCGATTTCTCCATACCCGTTGATTTCATTCGAGCTGAATCCTACGACTCCAAAACTGAGTCAAATGGCGCACCAATCATTTCCTTCGATTTAAAGGTTGACATCAACGCTCGTCACGTCATCTTGGTTGAAGACATTGTAGATACTGGTCATACCTTGTCTAGAGTCTTTAAGCACTTGAAATCAAAAGGAGCATCCTCTGTTTCTGTGTGCACTTTCCTTGATAAACCTTCAAGGAGAAAGGTGGATGTTCAGTTGGTCGGTGAAGGAAAATTCTACCGTGGATTTGAGTGCCCAGACTACTTTGTTGTAGGTTATGGAATGGATTTTGCCGAACAGTACAGAAATTTGCCTTATATTGGTATTTTGAAGCCTGAACATTATAAGTAA 546 0.4469 MINKTILWSEGQISGRVSELAAKSDLVGSSPAPIVVGVAIGAFLFVADLVRKIDFSIPVDFIRAESYDSKTESNGAPIISFDLKVDINARHVILVEDIVDTGHTLSRVFKHLKSKGASSVSVCTFLDKPSRRKVDVQLVGEGKFYRGFECPDYFVVGYGMDFAEQYRNLPYIGILKPEHYK 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04227 181 FunFam Hypoxanthine phosphoribosyltransferase 2 181 - -
Spst3g04227 181 CDD PRTases_typeI 33 133 IPR000836 -
Spst3g04227 181 Gene3D - 1 181 IPR029057 -
Spst3g04227 181 SUPERFAMILY PRTase-like 5 181 IPR029057 -
Spst3g04227 181 NCBIfam hypoxanthine phosphoribosyltransferase 6 175 IPR005904 GO:0004422|GO:0006166
Spst3g04227 181 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 4 180 - -
Spst3g04227 181 Pfam Phosphoribosyl transferase domain 17 162 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04227 Spst-Chr3 93670618 93673396 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04227 4 180 PRT Gene Family AT1G71750 62.632 2.21e-77 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04227 K00760 - gmx:100037484 283.878