Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04214 ATGAAGTGTTTCTTCTTCAAAGACAAGTGTAAATCCGCCCCTGAATTGCATAAGAAGAAAAACCCCGCCGTGAACCGCGCCGCCAACTCCACCGGCTCCCTGTCTTCGCCCAAGAGCGTGAAGGACTTGTACAGAGAGAAAGAGAACAGCTTCAGAGTTTTCACTTTGCAAGAGCTCAGAGATGCCACCGAAGGTTTCAATAGGACGCTCAAGCTTGGCGAAGGGGGGTTCGGGAGTGTGTATAAAGGTTCCATCAGACCTTCCGATGGGCAAGGTGATCCATTTCCGGTTGCTATCAAAAGGCTCAACACGCGTGGCTTCCAGGGTCATAAAGAATGGCTTGCTGAAGTTCAATTTCTTGGCATTGTTAATCACCCAAATTTGGTTAAGCTTTTGGGGTACTGCTCCGTGGACGGAGAAAGAGGAATCCAACGGCTGTTGGTGTATGAGTTCATGCCCAACAGGAGCTTGGAGGATCACCTCTTCAATAAAAGTTTACCACCCCTGCCTTGGAAAACAAGATTGGAGGTCATGCTTGGTGCTGCTCAAGGATTAGCTTATCTCCATGAAGGACTGGAGATTCAGGTGATCTACCGAGATTTCAAGTCTTCAAATGTTCTATTGGATGCGGACTTCCATCCAAAGCTCTCAGATTTTGGTCTTGCTAGAGAAGGACCACAAGGTGATCAGACTCATGTATCCACTGCGGTGGTCGGGACACAAGGATATGCTGCACCAGAGTACATTGAAACGGGTCATCTAAAAGTTCAGAGCGACATGTGGAGTTTTGGTGTAGTACTTTATGAGATCCTCACAGGAAGAAGATCATTGGAAAGAAACCGTCCCACAGCAGAACAAAAGCTTTTAGATTGGGTCAAACAGTACCCTGCTGACACCAGCAGGTTCGTGGTGATAATGGACCCACGTCTCAGGAACCAGTATTCTCCCCAAGCAGCTCGCAAAATAGCCAAGTTGGCTGATAGCTGCTTGAAGAAGAATCCAGAAGATAGACCATCCATGACTCAGATAGTTGAAGTCTTGAAGCAAGCATTGCAACACTCAGAAACTTCAAACTCTTCTTCTCAAGACATTGCTGAATCCTCCTCATCTCGTTCCAAATTGGTCCGAAAAGGTAAATAG 1140 0.4684 MKCFFFKDKCKSAPELHKKKNPAVNRAANSTGSLSSPKSVKDLYREKENSFRVFTLQELRDATEGFNRTLKLGEGGFGSVYKGSIRPSDGQGDPFPVAIKRLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDGERGIQRLLVYEFMPNRSLEDHLFNKSLPPLPWKTRLEVMLGAAQGLAYLHEGLEIQVIYRDFKSSNVLLDADFHPKLSDFGLAREGPQGDQTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEILTGRRSLERNRPTAEQKLLDWVKQYPADTSRFVVIMDPRLRNQYSPQAARKIAKLADSCLKKNPEDRPSMTQIVEVLKQALQHSETSNSSSQDIAESSSSRSKLVRKGK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04214 379 SUPERFAMILY Protein kinase-like (PK-like) 48 347 IPR011009 -
Spst3g04214 379 ProSitePatterns Protein kinases ATP-binding region signature. 72 100 IPR017441 GO:0005524
Spst3g04214 379 Gene3D Phosphorylase Kinase; domain 1 46 151 - -
Spst3g04214 379 Gene3D Transferase(Phosphotransferase) domain 1 152 375 - -
Spst3g04214 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Spst3g04214 379 Pfam Protein tyrosine and serine/threonine kinase 70 347 IPR001245 GO:0004672|GO:0006468
Spst3g04214 379 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 152 361 - -
Spst3g04214 379 PANTHER OS01G0588500 PROTEIN-RELATED 36 352 - -
Spst3g04214 379 ProSiteProfiles Protein kinase domain profile. 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04214 379 MobiDBLite consensus disorder prediction 351 379 - -
Spst3g04214 379 CDD STKc_IRAK 72 349 - -
Spst3g04214 379 MobiDBLite consensus disorder prediction 351 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04214 Spst-Chr3 93599292 93601455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04214 3 347 Glycoside Hydrolase AT3G07070 42.297 1.48e-89 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst3g04214 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04214 - - gmx:100786966 690.649