Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04183 ATGGGTTGCCTACACTCCAAAACCGCTCATCTTCACTCTCCTGAAGACCCTCCCACTGCCTTGCCAGACTCCAAAAAACCCGATCCAGTTGTTAATTTATTTTTTGGTTTTGATTTTGAAGGGAATGGTGGGGATGATGTTGATCAAGAGGGTCAGGTCCCAGCATTCAAAGAGTACGGTCTGATTGAACTTCGAAGGGCCACAAATGAGTTCAGCACAGATTACATTGTTTCTGAGAGTGGGGAGAAAGCCCCTAATGTGGTCTACAGAGGGAAGCTTGAGAACAATCGGTTAGTTGCTGTGAAGCGCTTCTCTAAACTGTCTTGGCCTGATGCTCAACAGTTCATGGCAGAGGCAGCTGGAGTTGGGAAAGTGAGGCACAAGAGACTGGTGAATCTAATTGGTTGTTGTGCTGAGGGAGATGAAAGGCTCTTGGTAGCTGAGTACATGTCAAATGATACTTTGTCCAAACATCTCTTTCATTGGGACAAGCAACCATTACCATGGGAAATGCGTGTAAGAGTTGCATACCATGTTGCCCAGGCACTAGATCATTGCAGCTTGGAAAACCGGAAAATATATCATGATCTAAATGCATATAGGATTCTTTTTGATGAGGATGGTGATCCCCGCCTATCTAGTTTTGGGCTTATGAAAAATAGTCGAGACGGGAAGAGCTACAGTACTAATTTAGCTTACACTCCACCTGAATTTTTGCGAACAGGAAGGATAATCCCGGAGAGTGTGATCTACAGTTATGGAACTGTTCTTCTGGATCTTTTAAGTGGCAAGCATATTCCCCCAAGCCATGCTTTGGACCTGATTAGAGGGAAAAATGTTTTGTTGTTGATGGACTCTTCTCTAGAAGGGCAATATGCAAACGATGATGCTACAAAGTTGGTTGAGCTTGCTTCAAAATGTCTTCAGTTTGAGGCTAGAGAACGACCTGAAATTAAGTTTCTTCTTACTTCCGTTACACCTCTTCAGAAGCAGAAAGAGGTAGCATCTCATGTGTTAATGGGCCTAACTAAAAACACAGCAGTGCTACCAACCATGCTTTCTCCCCTTGGAAAGGCTTGTGCAAGGATGGATCTTACTGCAGTGCATGATATATTGTTAAAAACAGGTTATAAAGATGAAGAAGGTGCAGAAAATGAGCTTTCATTCCAAGAATGGACACAACAAGTGCAAGATATCTTGAATACAAAAAAGTTTGGGGATATTGCATTCAGAGACAAGGATTTCAAAAATGCTATTGAGTATTATTCTAAGTTGGTGGTTATGATGTCTGTTTCTTCTGCTACTGTGTTTGCAAGGAGAGCTTTCTCCTACTTGATGAATGATCAAGCAGAACTTGCATTAAGGGATGCCATGCAGGCACAGGTCTGCATACCTGATTGGCCAACTGCATTCTACCTGCAGGCTCTTGCTCTCTCAAAGCTGGGAATGGAAACTGATGCACATGACATGCTCAATGATGGGGCTGCCTTTGAAGCAAAGAGGTCTAACAGCTGGCGTGGGTGCTGGTTTAAGGGGCAAGCAAAAGAACTCTGGTATAAGATGTTCTCAAGGAATATTACAAAATCGAATGCAACCGGTCAGTGGAATCATTATGTCTACATTTGGAATGCTGGTCTTGCAAAAGATGTTTCTCTCCTAATTTTTCCTGATCTTGTGGCTTTTGATGCTTTTGGAAATATTTTAAAGACAGTCGTGCTTGTGATGCTGATCATGAAAAAAGAAAAGCCATATAGTTATATGGATAACAAATCACCGAGCAAGGGGTCCAAGGAGGTGGCACGTGAGTCTCTGATTGCTATCTCTAACTCCCTGCCTGAAAAGAGCCTGGATTCAAACTGTGTGTCTGAGAGCAAGAAATCAGATGGGGTTGCGATGTCAAACCGTGATAAAAATGACAAATTTAGGTCTGAACTGATTTCAATTTCGTACGCTGAATCCCCTGATGTCAAAATCTGA 1977 0.4259 MGCLHSKTAHLHSPEDPPTALPDSKKPDPVVNLFFGFDFEGNGGDDVDQEGQVPAFKEYGLIELRRATNEFSTDYIVSESGEKAPNVVYRGKLENNRLVAVKRFSKLSWPDAQQFMAEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEYMSNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSLENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNVLLLMDSSLEGQYANDDATKLVELASKCLQFEARERPEIKFLLTSVTPLQKQKEVASHVLMGLTKNTAVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVSSATVFARRAFSYLMNDQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAHDMLNDGAAFEAKRSNSWRGCWFKGQAKELWYKMFSRNITKSNATGQWNHYVYIWNAGLAKDVSLLIFPDLVAFDAFGNILKTVVLVMLIMKKEKPYSYMDNKSPSKGSKEVARESLIAISNSLPEKSLDSNCVSESKKSDGVAMSNRDKNDKFRSELISISYAESPDVKI 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04183 658 Gene3D Phosphorylase Kinase; domain 1 46 149 - -
Spst3g04183 658 Gene3D Tetratricopeptide repeat domain 397 507 IPR011990 GO:0005515
Spst3g04183 658 MobiDBLite consensus disorder prediction 614 628 - -
Spst3g04183 658 FunFam probable serine/threonine-protein kinase At4g35230 397 506 - -
Spst3g04183 658 FunFam probable serine/threonine-protein kinase At4g35230 46 149 - -
Spst3g04183 658 FunFam probable serine/threonine-protein kinase At5g41260 151 342 - -
Spst3g04183 658 Gene3D Transferase(Phosphotransferase) domain 1 151 343 - -
Spst3g04183 658 MobiDBLite consensus disorder prediction 1 26 - -
Spst3g04183 658 SUPERFAMILY Protein kinase-like (PK-like) 63 325 IPR011009 -
Spst3g04183 658 MobiDBLite consensus disorder prediction 614 635 - -
Spst3g04183 658 SUPERFAMILY TPR-like 398 500 IPR011990 GO:0005515
Spst3g04183 658 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 48 502 IPR045845 GO:0004672|GO:0009742
Spst3g04183 658 ProSiteProfiles Protein kinase domain profile. 74 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04183 658 Pfam Protein tyrosine and serine/threonine kinase 87 322 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04183 Spst-Chr3 93236655 93246877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04183 40 325 Glycoside Hydrolase AT3G07070 34.194 4.16e-40 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Spst3g04183 PK_Tyr_Ser-Thr 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04183 K14500 - gmx:100793576 979.933