Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04182 ATGGGAAGTGGAGTTTCAACCCTGTGTTGGTGCTACCGGAGCAACGAACCGTGCCACCAGGACGTCATATTCACCGCCACAGAGCCATTGGACGAAACCCTAGGGCACTCCTTCTGCTACGTCAGATCCTCTGCTCGCTTCCTCTCTCCTAATCACTCCGATCGCTTTCTCAGCCCCTCCACCTCCCTCCGCTTCTCCCCCACTCATGAACCCCGAACCCGACCCGAATCACATGAAACCGGCTTCAAAGCCATTTCCGGAGCCTCCGTCAGCGCCAACAGTTCTCTCCCCACCACCGTCATTCACTTAGACGAAGACACCCTCGATTGCGTTAGAGCTGCCACCAAGGGCAATATCGTCAATGGCTTCGAAAGCACGGCTTCGTTTAGCGCGCTCCCGCTCCAGCCCGTTCCCCGAGGAGGCGAGCCCTTCGAGGTTAGTGGCTTCTTCCTCTCCGGTCCAATTGAAGCCAACGCCGTCTCCGGTCCTCTCCCCGCGGCAGCCGACGGCGGCGGCGGCGGCGAGGTTCCTTTCTCTGCGCCGCTCAGCGGCCTCTACGGTAAGAAGAACACGAAGAAAAAGGTGATTTCGGGATTCCGGAAGGCGTTCAACCGGAACGCGCATGAGATGAAGCGGCCGTGGGTGGTTCCAGTGCCGGAGAAGAAGGAGGCGGCGGCGGAAGCGAGGGGCGGCGAGGGCAATGTGCAGTGGGCGTTGGGGAAGGCTGGGGAGGATCGCGTCCACGTGGTAGTGTCGGAGGAGCAAGGGTGGTTGTTTGTTGGGATTTACGACGGTTTCAACGGCCCCGACGCACCGGAGTTTCTGATGGGGCACCTCTACCGTGCCGTTCACAGCGAGCTTCAAGGTTTATTCTGGGAACTGGAAGACGAACAACCGTTGCCGCAAGAGAGCAATCCCGTGGTGGAAGGAACGGAGAGTAAACGGCGTAAGCTGTGGGAGCTTCTGGCTGAGGACGGACTCGACCTTTCTGGTTCGGATAGGTTCGCGTTTTCCGTGGACGATGCTTTGAGCGTTAACAACGCCAAAGCGGGGTCTGCTGTGAGTAGGAGGTGGTTGCTGCTGTCGAAGTTGAAGCAGGGTTTGTCGAAACAGAAGGAGGGTGAAGGGAGAGGGTGGAATTTGGGGAATGAGGAGAAGGAAAAGGAGAAGCCTTGTGGGAGGAAGCGGAAGGTGGGTCCCGTGGATCATGGACTTGTTTTGAGTGCGTTGGCTCGGGCACTTCAAGTCACGGAGGTTGCGTATTTGGATATGACGGATAAGCTTCTGGATACAAATCCGGAGCTTGCTTTGATGGGTTCGTGTTTGTTGGTGGTGTTGATGAGGGATGAAGATGTGTATGTGATGAATGTTGGGGATAGTAGGGCTATTGTTGCACACTATGAATCCAAGGAGGTTGATTCTAGTGTTGAATCGGGAAGCAAGGGTGGTGTTGAGTCCGGTGCTGAGAGCATAGTTGAAGAGTCATTGGGTTTGGGCCAAAGTGCAAGTGCTCAACAAATGAGGTTGGCGGCGTTGCAGCTCTCTACTGACCACAGCACCAGCATTGAAGAAGAAATCATTAGGATTAAAAACGAGCATCCTGATGATACCCAATGCATAGTCAATGATAGAGTTAAAGGCCGCCTGAAGGTCACCAGAGCATTCGGGGCTGGATTTTTGAAACAGCCGAAGTTGAATGATGCAGTACTAGAGATGTTTCGCAATGAATATATTGGCACTGCACCATATATATCGTGCTCTCCTTCACTACGTCACCATAGATTACGCCAGAGAGATCAGTTCCTAATCCTCTCATCTGATGGTTTATATCAATATCTAAACAATGAAGAAGTTGTTTCTCATGTTGAGAGCTTCATTGAAAAATTTCCAGAAGGAGATCCAGCCCAACATTTAATAGAAGAGGTGCTTCTCCGTGCAGCTAAGAAAGCTGGAATGGATTTTCATGAATTGCTCGATATACCACAAGGAGATCGGAGGAAGTACCACGACGATGTTACTGTCATGGTGGTATCACTCGAAGGGAGAATCTGGAAATCGTCAGGAAAATATCCGTGA 2076 0.5275 MGSGVSTLCWCYRSNEPCHQDVIFTATEPLDETLGHSFCYVRSSARFLSPNHSDRFLSPSTSLRFSPTHEPRTRPESHETGFKAISGASVSANSSLPTTVIHLDEDTLDCVRAATKGNIVNGFESTASFSALPLQPVPRGGEPFEVSGFFLSGPIEANAVSGPLPAAADGGGGGEVPFSAPLSGLYGKKNTKKKVISGFRKAFNRNAHEMKRPWVVPVPEKKEAAAEARGGEGNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVHSELQGLFWELEDEQPLPQESNPVVEGTESKRRKLWELLAEDGLDLSGSDRFAFSVDDALSVNNAKAGSAVSRRWLLLSKLKQGLSKQKEGEGRGWNLGNEEKEKEKPCGRKRKVGPVDHGLVLSALARALQVTEVAYLDMTDKLLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYESKEVDSSVESGSKGGVESGAESIVEESLGLGQSASAQQMRLAALQLSTDHSTSIEEEIIRIKNEHPDDTQCIVNDRVKGRLKVTRAFGAGFLKQPKLNDAVLEMFRNEYIGTAPYISCSPSLRHHRLRQRDQFLILSSDGLYQYLNNEEVVSHVESFIEKFPEGDPAQHLIEEVLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVVSLEGRIWKSSGKYP 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04182 691 SMART PP2C_4 228 677 IPR001932 -
Spst3g04182 691 Pfam Protein phosphatase 2C 426 648 IPR001932 -
Spst3g04182 691 CDD PP2Cc 402 679 IPR001932 -
Spst3g04182 691 MobiDBLite consensus disorder prediction 59 79 - -
Spst3g04182 691 MobiDBLite consensus disorder prediction 372 395 - -
Spst3g04182 691 Gene3D - 216 686 IPR036457 -
Spst3g04182 691 ProSiteProfiles PPM-type phosphatase domain profile. 222 679 IPR001932 -
Spst3g04182 691 PANTHER PROTEIN PHOSPHATASE 2C 220 678 IPR015655 GO:0004722|GO:0006470
Spst3g04182 691 SUPERFAMILY PP2C-like 241 680 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04182 Spst-Chr3 93207264 93211831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04182 1 690 PP2C-type Phosphatase Gene Family AT2G35350 55.402 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04182 - - gmx:100779143 1138.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04182 3 93207264 93211831 Spst3g04182 3 93207264 93211831 PCT