Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04137 ATGCTCACCACCCTCCCTCCCTCCGACTCCCTCCTGGGCAACCCGTTTTCCGCCTTCTCCGGCGGCTTCATTTCCTGGGACGACGACTCCCAGCACCTACTCTCCCCAAAACCAGTGACTTCCAGCTCCGGCTCCGAGAAACCCGACCCAGACCCGGCTGAACCGGACCAAGCGGTGGTCTCGGTGATGGACGAGCGAAAACGACGGCGAATGATATCGAACCGCGAATCTGCCCGCAGGTCTCGCATGCGAAAACAGAGACACCTGGAGAACCTTCGGAACCAGTTGAACAAGTGCAGGGTCGAAAACCGGGAACTGAATAACCGGTTGCAGTTCGCCCTGCACCACTCTAACCGCCTCCGAACCGAAAACGAATGGCTCCGGTCCCAGCGAACCCTCCTCCGCCAAAAAGTCGCCAACTTAACCCAAATTTTGATTTTCCAACAATTCCAACAACCCATCTCCCCTGCATGGACATGCAACACTTCGCTCATCCCTATTAATCAAGTTAATTAA 516 0.5562 MLTTLPPSDSLLGNPFSAFSGGFISWDDDSQHLLSPKPVTSSSGSEKPDPDPAEPDQAVVSVMDERKRRRMISNRESARRSRMRKQRHLENLRNQLNKCRVENRELNNRLQFALHHSNRLRTENEWLRSQRTLLRQKVANLTQILIFQQFQQPISPAWTCNTSLIPINQVN 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04137 171 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 69 84 IPR004827 GO:0003700|GO:0006355
Spst3g04137 171 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 64 127 IPR004827 GO:0003700|GO:0006355
Spst3g04137 171 SMART brlzneu 62 126 IPR004827 GO:0003700|GO:0006355
Spst3g04137 171 PANTHER BZIP TRANSCRIPTION FACTOR 44 39 148 - -
Spst3g04137 171 SUPERFAMILY Leucine zipper domain 66 115 IPR046347 GO:0003700|GO:0006355
Spst3g04137 171 CDD bZIP_plant_GBF1 67 118 IPR045314 GO:0003700|GO:0006355
Spst3g04137 171 MobiDBLite consensus disorder prediction 30 56 - -
Spst3g04137 171 FunFam BZIP transcription factor 64 115 - -
Spst3g04137 171 Coils Coil 75 109 - -
Spst3g04137 171 Gene3D - 64 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04137 Spst-Chr3 92567431 92567946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04137 1 149 bZIP Transcription Factor Family AT3G49760 38.509 1.72e-27 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04137 - - gmx:100809244 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04137 3 92567431 92567946 Spst3g04137 3 92567431 92567946 PCT