Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04119 ATGGATACCTTGTTTAGGCTAGTAAGTTTTCAACAGCAACACCATCAACCACAACCCGATCCATCCCTCAACTCCACCACCAGCAGAACTTCTAGCAGCTCCAGATCCTCCCGGCAAAACTACTACTACTCCCACCAAGAAGACGAAGAATGCTTCAACTTTTACATGGATGAAGAAGACCTATCCTCGTCTTCTTCCAAACACTACTACCCATACCACAACGTATCCACCACCACCACCACCACAACCAACACCTTCAGCACCACCACCAACACCGATTACTCTTACTCCTTCTCCCCCACCCCTCCCCTCCCCGACTTCAACTTCCAATTCTCCCCCAACTGGTCCCACAACCTCCTCCTCGAAACCGCACGCGCCTTCGCCGACAACAATAGCACGCGCCTCCATCAGCTCCTCTGGATGCTCAACGAACTAAGCTCCCCATACGGCGACACCGATCAAAAGCTCGCCGCGTATTTCCTCCAAGCCCTGTTCAGTCGCGTCACCGACGCAGGAGACCGAACCTTCCGAACCTTAGCCTCGGCGTCGGAGAAAACATGCTCCTTCGAGTCAACGAGGAAGACGGTGTTAAAATTCCAAGAAGTCAGCCCCTGGACAACGTTCGGACACGTGGCGTCCAACGGCGCCATCTTAGAAGCCTTAGAAGGAAACCCCAAATTGCACATACTTGACATCAGCAACACCTATTGCACCCAATGGCCAACCCTTCTAGAAGCATTGGCAACTCGAACCGACGAAACGCCGCACCTCAGGTTAACCACCGTCGTCACCGGGAGAACCGGTAACTCAGTGCAGCGCGTCATGAAGGAAATCGGAACAAGAATGGAGAAGTTCGCGCGACTCATGGGCGTTCCGTTCAAGTTCAAGGTCGTTCACCACGCTGGCGATCTCTCTGACCTCAATTTCTCCGAACTCAACATCAAAGACGACGAGGCCCTCGCCATCAACTGCGTAAACGCGCTGCATTCGGTTTCCGCGGCTGGGAACGGCCGGGACGCGTTGATATCGTCGCTGCAAGGGTTGCAGCCGAGGATCGTGACGGTGGTAGAGGAGGAGGCTGATTTGGACGTGGGAATCGAGGGCTACGAGTTCGTGAGAGGCTTCGAGGAGTGTTTGAGGTGGTTTAGGGTTTACTTCGAGGCGCTGGACGAGAGTTTCCTGAAGACGTGCAACGAGAGGCTGATGCTGGAGCGCGCGGCTGGGAGGGCAGTGGTGGACCTGGTGGCGTGCTCTCCGGCAGAGTCTGTGGAGCGGCGAGAGACGGCGGTGCGATGGGCGATGCGGCTGCATGGGGGAGGGCTAAGCGCTATGCCGTTCAGCGAAGAGGTATGCGACGACGTTAGAGCGCTGTTGAGAAGGTACAAGGAAGGTTGGTCTATGACACCGTGCCCTGACGCCGGAATATTCCTTTCGTGGAAGGAAACGCCGGTGGTGTGGGCCAGTGCATGGAGGCCGTAA 1479 0.5585 MDTLFRLVSFQQQHHQPQPDPSLNSTTSRTSSSSRSSRQNYYYSHQEDEECFNFYMDEEDLSSSSSKHYYPYHNVSTTTTTTTNTFSTTTNTDYSYSFSPTPPLPDFNFQFSPNWSHNLLLETARAFADNNSTRLHQLLWMLNELSSPYGDTDQKLAAYFLQALFSRVTDAGDRTFRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALEGNPKLHILDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTGRTGNSVQRVMKEIGTRMEKFARLMGVPFKFKVVHHAGDLSDLNFSELNIKDDEALAINCVNALHSVSAAGNGRDALISSLQGLQPRIVTVVEEEADLDVGIEGYEFVRGFEECLRWFRVYFEALDESFLKTCNERLMLERAAGRAVVDLVACSPAESVERRETAVRWAMRLHGGGLSAMPFSEEVCDDVRALLRRYKEGWSMTPCPDAGIFLSWKETPVVWASAWRP 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04119 492 ProSiteProfiles GRAS family profile. 107 491 IPR005202 -
Spst3g04119 492 MobiDBLite consensus disorder prediction 7 40 - -
Spst3g04119 492 Pfam GRAS domain family 118 491 IPR005202 -
Spst3g04119 492 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 87 481 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04119 Spst-Chr3 92384761 92386239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04119 1 492 GRAS Transcription Factor Family AT4G37650 58.161 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst3g04119 GRAS 4.9e-100 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04119 - - gmx:100778524 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04119 3 92384761 92386239 Spst3g04119 3 92384761 92386239 ECH
Spst3g04119 3 92384761 92386239 Spst3g04119 3 92384761 92386239 PCT