Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04112 ATGAAACCTCATCATCATCATTTCACTTTCTTTTTCATTCTATCAACAGTGTCTCTATTCCCCACTTCCAAAGCTACCAACACAACTCAATTCCAAATATACAATGAAACAAGAAGGATTCTCCACCAGCCTTTGTTCCCGGAGGTTTCAGCTCCGCCGCCGGTCACCCCACCCCCGCCTCCGCCTCCGGATATTCCTTCTTCTCCCGACATTCCTTTCTTCAATGAGTATCCCGCGGGGCAGCCACCGCCGCTGCAGAACCTGCCTCCGGCGACGACCTCCGGCGCCGTAATCGCGAACCCGACGGCGACGCAGCCCACGAAGCCGGCGAAGAAGGTGGCAATCGCTATCTCCGTGGGAATCGTGACGCTGGGAATGTTCTCCGCATTGGGCTTCTTCTTGTACAGGCACAGAGCAAAACACCCAATGGAAACTCAGAAACTCGTTTCTCGGAGGGTTCTACAAGATTCTCCGCGGGCCCCACCACCCTCTAGCTTCCTCTACATTGGGACTGTGGAGCCCGCCAGAACGTCGCTCAGCGAACCCAACGGAACGAACATTAGCACTTCGCCTTATCGAAAGCTTGATTCTATTAAGCTGAACTCCGATCACCGTTACCGCCCCAGTCCCGAGTTACAACCACTGCCGCCGCCGCCACCTCATAAGCTGCCGGACGAAAGTCAATCGCCGCCGGCGGGATTCTCCGACTCGTCATCTTCGGAGGAGGAAAGCTGTGAGACCGCGTTTCATTCGCCGCACGGCTCGTCGCTCAGCCGTGAAGAGAACTATTTCACGCCCGTATCGCGTCACAGTAGTCTCGCCGCTGCCGTACCGGTGGCGGCTGCTCCCGTGGTTCCTTACTCGAAGAGAACTTCACCGAAATCCCGGTTCTCGGCTCCTTCGCCGGATATCAGTAACATGTTTGTACCGTCGATGAAGCATTCTCCGGCCACGGCACCGGCACCGGCATCACCAACTTCAACCAATTATCCGCAAATAGAAAAAGTAATTACCTTGGGTCCTTCTAGAAGACCGAAATTCTCATCGCCTCCCCCAGCACCGAATTTGACTCATATTATTAAGCCTGCTCCTCCTCCTCCTCCTCCCCCGCCCCCGCCGCTGCCAGCGTCGTGGAAGGGTTGGTCTCCGTCAATTAGTGCATCTTCGTCTGCTGTGTCAAGGAAGCAGCGAGAGTCTTGGTCTCCAAATGAAGGAGGGTCTTCTTCTAAGAGTGTTAGTGAAAGGAAAGGCTCTTCTGAGGAAGTTGACAAAAGACACGGAGGTGATGACGTGGATGGAACGAAACCCAAGTTGAAGGCTCTGCATTGGGATAAAGTGTGTGCTACTTCTGACCGTGCCACTGTGTGGGACCAACTAAAATCCAGCACGTTTCAGTTAAACGAGGACATGATGGAGACCCTGTTTGGCTGCAAATCCACACCTTCTGCTTTTAAAGAGACTGTTACTAGAAGATCAGTTCTCCCCCCTGTTGAACTCGAGAATAGGGTGTTAGATCCCAAGAAATCCCAAAACATAGCTATACTACTAAGGGCACTCAATGTCACAAGAGATGAGGTGTGCGAAGCTCTTTTGGATGGGAACCCTGAAGGTCTGGGAACTGAGCTATTGGAGACTCTAGTGAAGATGGCTCTAACAAAGGAGGAGGAAATAAAACTTAAAAATTATGACGGTGACCTATCAAGACTTGGTTCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATATTCCTTTAGCTTTTAAAAGAATTGAAGCCATGCTGTACAGGGCTAATTTCGAAACAGAAGTTAACTACCTTAGGAAGTCCTTTCAGACACTGGAGGCAGCAAGTGAGGAATTAAAGAACAGTCGGTTATTCCTCAAACTTCTTGAAGCTGTTCTAAGGACAGGAAACAGAATGAATGTTGGCACCAATCGAGGTGATGCTAAATCTTTCAAACTGGACACACTTCTAAAACTTGTAGATATAAAGGGCACAGATGGGAAGACAACACTTCTTCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGAACAGGTGGTGAATCTGCAAATGAAAATGTTCAAAACCAAACAAATTCCCAATTCAACGAGGACGAGTTCAGAAAGAAAGGATTGCAGGTTGTGGCTGGACTGAGTAGAGACCTTAGTAATGTCAAAAAGGCAGCAGGAATGGACTCGGATGTGTTAAGCAGCTATGTCTCAAAGCTTGAAATTGGGCTTGATAAGGTGAGCTTAGTTTTGAAATGTAGAAAGCCAGATATGCATGGAAATTTCTTTAACTCAACCGGGCTATTTTTGAAAGATGCTGAAGAGGAAATTATTAGGACCAAGGCTGATGAGAGAAAGGCCTTGTTCCTAGTGAAAGAAGTTACAGAATACTTTCATGGTGATGCAGCAAAGGAAGAAGCGCACCCTTTCAGAATTTTTATGATTGTGAGAGACTTTTTAAATAGTTTGGATCAAGTCTGCAAAGAAGTGGGAAGAATGCAGGATAGAACTGTGATTGGTTCAGCTAGATCCTTCAGGATAGCCGCAAGTGCATCATTGCCTGTTCTCAACAGGTACCGTGCAAGACAAGATAGAAGTTCAGATGAGGAAAGCTTATCCCCCTAG 2634 0.4825 MKPHHHHFTFFFILSTVSLFPTSKATNTTQFQIYNETRRILHQPLFPEVSAPPPVTPPPPPPPDIPSSPDIPFFNEYPAGQPPPLQNLPPATTSGAVIANPTATQPTKPAKKVAIAISVGIVTLGMFSALGFFLYRHRAKHPMETQKLVSRRVLQDSPRAPPPSSFLYIGTVEPARTSLSEPNGTNISTSPYRKLDSIKLNSDHRYRPSPELQPLPPPPPHKLPDESQSPPAGFSDSSSSEEESCETAFHSPHGSSLSREENYFTPVSRHSSLAAAVPVAAAPVVPYSKRTSPKSRFSAPSPDISNMFVPSMKHSPATAPAPASPTSTNYPQIEKVITLGPSRRPKFSSPPPAPNLTHIIKPAPPPPPPPPPPLPASWKGWSPSISASSSAVSRKQRESWSPNEGGSSSKSVSERKGSSEEVDKRHGGDDVDGTKPKLKALHWDKVCATSDRATVWDQLKSSTFQLNEDMMETLFGCKSTPSAFKETVTRRSVLPPVELENRVLDPKKSQNIAILLRALNVTRDEVCEALLDGNPEGLGTELLETLVKMALTKEEEIKLKNYDGDLSRLGSAERFLKAVLDIPLAFKRIEAMLYRANFETEVNYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKSFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGTGGESANENVQNQTNSQFNEDEFRKKGLQVVAGLSRDLSNVKKAAGMDSDVLSSYVSKLEIGLDKVSLVLKCRKPDMHGNFFNSTGLFLKDAEEEIIRTKADERKALFLVKEVTEYFHGDAAKEEAHPFRIFMIVRDFLNSLDQVCKEVGRMQDRTVIGSARSFRIAASASLPVLNRYRARQDRSSDEESLSP 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04112 877 MobiDBLite consensus disorder prediction 210 226 - -
Spst3g04112 877 MobiDBLite consensus disorder prediction 381 413 - -
Spst3g04112 877 Gene3D Formin, FH2 domain 435 849 IPR042201 -
Spst3g04112 877 ProSiteProfiles Formin homology-2 (FH2) domain profile. 428 852 IPR015425 -
Spst3g04112 877 MobiDBLite consensus disorder prediction 177 259 - -
Spst3g04112 877 MobiDBLite consensus disorder prediction 177 196 - -
Spst3g04112 877 MobiDBLite consensus disorder prediction 230 259 - -
Spst3g04112 877 MobiDBLite consensus disorder prediction 47 68 - -
Spst3g04112 877 MobiDBLite consensus disorder prediction 414 436 - -
Spst3g04112 877 SMART it6_source 428 841 IPR015425 -
Spst3g04112 877 SUPERFAMILY Formin homology 2 domain (FH2 domain) 364 838 - -
Spst3g04112 877 MobiDBLite consensus disorder prediction 345 378 - -
Spst3g04112 877 MobiDBLite consensus disorder prediction 320 335 - -
Spst3g04112 877 Pfam Formin Homology 2 Domain 431 826 IPR015425 -
Spst3g04112 877 PANTHER FORMIN-RELATED 10 871 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Spst3g04112 877 MobiDBLite consensus disorder prediction 308 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04112 Spst-Chr3 92344435 92348375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04112 409 867 FH2 protein (formin) Gene Family AT5G67470 71.645 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04112 - - gmx:100803578 1300.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04112 3 92344435 92348375 Spst3g04112 3 92344435 92348375 ECH
Spst3g04112 3 92344435 92348375 Spst3g04112 3 92344435 92348375 PCT