Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04108 ATGCGGACAGGCCGGGATAATCGTACTGGTTTGGTGGATATGATGAGGGGAGAAGAGTTAGCATTTGCGTTTTCTCCTACCATGGTGGAAGTGACTGTGAGGGAGTTCGACCCAAATAAGGACAGCGAAGGAGTGGAAGCCGTTGAAAGAATATGTGAGGTTGGACCCAGTGGAAAGCTTTCCCTCTTCACCGACCTCCATGGTGACCCTATTTGCAGGGTCCGCAACTCACCTACTTTCCTCATGCTGGTTGCCGAAATTGGGCAAGAGACAGTGGGAATGATAAGAGGTTGCATAAAAACCGTTACATGCGGAAAGAAGCTCCACAGGCATGGTTCCAAGCAAGTCCCTATTTACACCAAACTGGCCTACATATTAGGCCTCCGCGTATCTCCACACCACAGGAGAATGGGAATAGGGTTGAAGCTGGTGCAGAGAGTGGAGGAGTGGTTCAGAGAGAATGGAGCGGAGTACGCGTACATGGCAACGGAAAAGGACAACGTGGCATCAGTTAAGCTCTTCACCGACAAATGCGGCTACTCAAAGTTTCGTACCCCGTCCATCCTCGTTAACCCCGTTTTTGGTCACCCACTCAGGACCTCCTCCAAAGTCACCATCATACGACTTGCCCCAAACGACGCCGAATTGCTCTACCGCACCAAGTTCGCCACCACCGAGTTCTTCCCGCGCGACGTCGACTCCGTCCTCAACAACAACCTTTCTCTCGGCACCTTCCTCGCCGTTCCCCGCGGCTCATACCGCCCTGACACGTGGCCCGGTGCGCCCCACTTTCTCGCGGACCCACCCTCCTCCTGGGCCCTCCTCAGCGTGTGGAACTGCAAGGATGTGTTCACGCTCCAGGTGAGGGGCGCGTCGCGCGTGAAGAAGACGCTCGCCAAGACCACTCGGCTCCTCGACCGCGCCCTCCCCTGGCTGCGCTTGCCCTCCATCCCCAACTTATTCCAGCCGTTTGGGTTTCACTTTTTGTACGGGCTCGGAGGGGAGGGCCCACAGGCCCAGAAGATGGTGCGTGCTTTGTGCGCCTTCGCTCATAACCTCGCCAAGGATCGTGGCTGCCAGGTGGTGGCTACTGAAGTTTCCAGCCAGGAACCCCTACGCTGCGCCATCCCGCACTGGAAGATACTCTCCTGCGAAGAGGATCTGTGGTGCATGAAGAGACTCGGGGAAGATTACAGTGATGGTTCTGTTGGTGATTGGACCAAATCTCCTCCCGGATTCTCAATTTTTGTTGATCCCAGAGAGTTCTAA 1269 0.5548 MRTGRDNRTGLVDMMRGEELAFAFSPTMVEVTVREFDPNKDSEGVEAVERICEVGPSGKLSLFTDLHGDPICRVRNSPTFLMLVAEIGQETVGMIRGCIKTVTCGKKLHRHGSKQVPIYTKLAYILGLRVSPHHRRMGIGLKLVQRVEEWFRENGAEYAYMATEKDNVASVKLFTDKCGYSKFRTPSILVNPVFGHPLRTSSKVTIIRLAPNDAELLYRTKFATTEFFPRDVDSVLNNNLSLGTFLAVPRGSYRPDTWPGAPHFLADPPSSWALLSVWNCKDVFTLQVRGASRVKKTLAKTTRLLDRALPWLRLPSIPNLFQPFGFHFLYGLGGEGPQAQKMVRALCAFAHNLAKDRGCQVVATEVSSQEPLRCAIPHWKILSCEEDLWCMKRLGEDYSDGSVGDWTKSPPGFSIFVDPREF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04108 422 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 31 199 IPR000182 GO:0016747
Spst3g04108 422 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 30 422 - -
Spst3g04108 422 Gene3D - 64 186 - -
Spst3g04108 422 Pfam Acetyltransferase (GNAT) family 77 180 IPR000182 GO:0016747
Spst3g04108 422 FunFam Probable N-acetyltransferase HLS1-like 40 187 - -
Spst3g04108 422 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 70 182 IPR016181 -
Spst3g04108 422 CDD NAT_SF 82 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04108 Spst-Chr3 92294866 92296580 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Spst3g04108 Acetyltransf_1 1.6e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04108 - - gmx:100775317 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04108 3 92294866 92296580 Spst3g04108 3 92294866 92296580 ECH
Spst3g04108 3 92294866 92296580 Spst3g04108 3 92294866 92296580 PCT