Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04088 ATGATTACTGGTAAGATTGGAAGGAGGCCTCACGTTGTTGCAGTTCATGAAACTGGCCGAAGTGATCGACTTGTATTGCCAAAGAAATTGGCCGAAGGCCTGGGATGGGAACAAACATACCCGTCTTCAGACGGAACAAGGATGTTTCTGTTTAATGAGAATTTCCTGGTACATCATGACAATATATCCAAGTTTCATGTGAAACCATCTGCATTACCAGACAGCTGGAAGCTGAGGGAAATATTTGTGACTGGTGTCGTAAGTGTTTCTGACATTGCCCTCACTGAACTTGATCTAAATGTGATTATTAGTACAGAGCTCACCAGCAGGGCAATTTCCCAGATGATGAAGAATTATAGTAAGCGAACTGCATTAGCTTTTCTGAGGCGGTTGATTTCAACGTCGGAGAAGAGGAGGCAGCGGTTCGGTCTCTTAAATAAGACTTTGTTCATCTTGTCGAATAAACCTTGGTCCTGTATCTTGATTCAAGGTTCGCATACAGAAGGAATTCATCCCAATCTGGAAAGGTACATGATATTATCCAGTAAACATAAAGATTGGTCTGAAACTTATGAGCAACAGCAAGGTGTTGTTAGACAGGAAACTGGCCGAAGGTACCCATCTTTTTCAGTGCTTGGCGAAAGCAATGATGTTTCTGTTTCAGCTCTTCCAGTCGAAAAATTGATTGTGAAAGCTGATGGATTGGGTGAAGAATTTCCTGCTATAGACCTTGATGTGGATGTTGAGATGATTACGGGTGATCAGCTTGCCATTGCCAAGAAAATGGGCCGAAGAAAGCATACACTTGAATTGTTTGTTGCTGACTGTGCTAGAAGTGTTTCTGACATTGCCCTCACTAAACTTGATCTAAATGTGATTATTAGTACAGAGCTCACCAACAGGGCAATTTCCCAGATGATGAAGAATTATAGTGGGTACATCATGACAATATCCAAGTTTCATGTGAAACCATCTCCACTACCAGACAGCTGGAAGCTGAGGCAAATATTTGTGACTGGTGTTGTGTTAGACAGTTACTTTGCTTTTAAATTGGAGCCTCAAATGACTGTTATCTTTCTGCCTCATGAATGA 1092 0.4158 MITGKIGRRPHVVAVHETGRSDRLVLPKKLAEGLGWEQTYPSSDGTRMFLFNENFLVHHDNISKFHVKPSALPDSWKLREIFVTGVVSVSDIALTELDLNVIISTELTSRAISQMMKNYSKRTALAFLRRLISTSEKRRQRFGLLNKTLFILSNKPWSCILIQGSHTEGIHPNLERYMILSSKHKDWSETYEQQQGVVRQETGRRYPSFSVLGESNDVSVSALPVEKLIVKADGLGEEFPAIDLDVDVEMITGDQLAIAKKMGRRKHTLELFVADCARSVSDIALTKLDLNVIISTELTNRAISQMMKNYSGYIMTISKFHVKPSPLPDSWKLRQIFVTGVVLDSYFAFKLEPQMTVIFLPHE 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04088 363 PANTHER CALCIUM-TRANSPORTING ATPASE 313 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04088 Spst-Chr3 92056091 92073886 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04088 62 87 Primary Pumps ATPases AT1G80660 80.769 7.12e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04088 K01535 - gmx:100785442 123.635