Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04077 ATGACCTTCCTCAGGGAAGACGAAGTTGATGATCATGAGCATGTGTCAATCAATGACAATCATGCCAACTGTGAAATTGTGACTCCTGAAGGTGATAAGTTAGGGAAATGGTTGAGGTTAGGCCTCAAAGGAGACATGCCTGAGGAAGCAGCAGAACAACAAAACCCATCAAAGCCTCTCCACAACAAGGTTTTCTCATGCAACTTCTGCATGAGAAAGTTTTACAGCTCACAAGCCTTAGGGGGTCACCAGAATGCACACAAGAGGGAAAGAGAAGCAGCTAGAAGCTACCAGTCTCGTAGGATGATGACAACAAGATCACCAATGGGGCTTGCTTACACTTCTCTGGCATCTAGGTCACTGGGAATACAGCCTCACTCCCTTGTGCACAAACCAGGCAGAGAAAGGTCTGCTATGGTGGCTAGATTCAGTGATGCCAACAGTAATGGGGTTGGAGTGGCATCATGGACACCCTTTATGCTTGAACAAGCTGTGGATTTCTATTGGCCAGGTAGCTTTCGGGTGGACTTGCCAAAGCAAGAGTCAGATGTTAATAAGATTGACTTAGATCTTCGGCTCTGA 582 0.4656 MTFLREDEVDDHEHVSINDNHANCEIVTPEGDKLGKWLRLGLKGDMPEEAAEQQNPSKPLHNKVFSCNFCMRKFYSSQALGGHQNAHKREREAARSYQSRRMMTTRSPMGLAYTSLASRSLGIQPHSLVHKPGRERSAMVARFSDANSNGVGVASWTPFMLEQAVDFYWPGSFRVDLPKQESDVNKIDLDLRL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04077 193 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 92 IPR013087 -
Spst3g04077 193 PANTHER ZINC FINGER PROTEIN 4-LIKE 12 193 - -
Spst3g04077 193 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
Spst3g04077 193 Gene3D Classic Zinc Finger 47 115 - -
Spst3g04077 193 SUPERFAMILY beta-beta-alpha zinc fingers 61 92 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04077 Spst-Chr3 91727298 91727879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04077 22 184 C2H2 Transcription Factor Family AT1G24625 37.195 5.96e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04077 - - ccaj:109809498 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04077 3 91727298 91727879 Spst3g04077 3 91727298 91727879 ECH