Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04072 ATGGAGATTCTTAAGCGCCATAGAATTCAACACTCTCTGTGTGTAGCTCTTGCTTTTCTTCAGTTCTCGTCACTGCAGTTCCCCTCACTCGGGTACAACGTCCCAGATAAGTACTTTATCAATTGCGGGTCAGACAACAGTGTTACCGAGAGTGGAAAGGTTTACGTTGGTGAATCAAGCCTTGGAACCAGTTTTGGTAGCAGCAGCAACACAGAAAAGAATGAGTCATCGGTGCCTTCTCCTCTATACCAAACAGCAAGGATTTTTAGAGGGGACAGTGGGTATAAGTTCAACATCGATACAAATGGCACCTACCTGGTACGCCTCCATTTCTTTCCTTTCTCTTCCCCGAGTAATCTTTCCTCGGCCAGGTTCAACGTTTCAGTTCCTGGTTTCTGGTTGTTGCAAAATTTTACTGGTACAAATGACACCAATAACAACTCCGCTTTAGTAAAAGAGTTTTTCATGCATATCACTTCCACCAGCTTGAAAATAACTTTCAGACCTCTGTCATCATCATTTGCGTTTGTTAATGCTATAGAACTCTTCGTACTACCCCTCCATTTGATCTCCGATGCTGTGGCGCGTTTCACTCCTATTGGAGGTTTATCTACCTACAGCGGAGATTTGTACTCTCGGGTGTTGGAGACCAAATATAGGCTTAATGTTGGTGGCCAAGCTACCAAAGATATGTTATTGAGAAACTGGATTCCAGATGATATTTATCTCTCTTATCCAGTAAACGCCAAGAACCATTCCCCTTACCAGGATCAAATTCGGTATCATGTAGGTGATGACTCCAATGGTCCAAACGCGACTAGAATTACTGCACCAACTGAGGTGTATGGAACTGCTAAAGAGACTAATAACATCTCTGACAGTGCCAGAGACTTTGGACTTTTAAACATAACATGGGCTCTTCCGGTGGAAAATAACTTAGATCATCTCCTTCGGCTTCACTTCTGTGACTATTGGAATTCAATAAGTGGCCTTACATACTTTGAACTTTCCATTTCCAACGCCCATGTCATGCAGATAAATAGTGACGTAAATGTGTCTAACTTGTTGCCTGCCCCTTATTATTATGATTTTGTGGTGAAGTCTGATGGCTTTGGGAATATTCGGGTCAGCCTAACACCTAATGGAACCGCTGAAATACCAAATGCATTTCTAAACGGGCTAGAAATAATGAAAGTGATTGAGCAATCAAATTCTGTTCCCCCTGACCTGGAATCTGATTCCAGTCATAATAGTCTTCCCGTGGTGCTGGGTTCAGTTCTCGGAGGTTTAGTCTTGGTTTTTGTTATGACGCTACTTGGTTTTCTTTGGTGTTTTAAAATGAGGAAGGAAAAGCCCGTTGAAAATTCGGACTGGTTGCCAATTCCCGTTAATGCTGGAGGGAGTTCTCACAGCAGATTGACTGATATAACCAGTCATGGCTCTCCCCTTCCCAACATAAACCTTGGGCTCAAACTTTCCTTGATTGATCTTCAATTGGCGACAAAGAACTTCCACGCAAGTCAGCTAATTGGCAAGGGTGGTTTTGGCAACGTCTACAAGGGAGTTCTCAGGAATGGCAATATAGTGGCTGTGAAAAGAAGTCAGCCGGGTTCAGGTCAAGGACTTCCAGAATTTCAGACAGAGATCATGGTTTTGTCTAAGATTCGGCACAAGCATCTTGTTTCCTTAATTGGGTATTGTGATGAGAAGTTGGAGATGATACTGGTTTACGAATACATGGAAAAAGGGACACTCAGGGACCATTTGTATAATACAAACTTGCCAAGCTTGTCCTGGAAGGTGAGGCTACAAATTTGCATTGATGCTGCCAGAGGACTTCACTACCTTCACAAAGGAGCAGCTGGGGGAATCATTCACCGTGATGTGAAGTCCACAAACATATTGCTTGATGAGAACCATGTTGCTAAAGTTGCTGATTTTGGTCTTTCAAGGTCAGGTCCTCTTGATCCTCAACCTTATGTCAGCACTGGTGTTAAAGGCACTTTTGGGTATCTTGATCCTGAGTATTTCAGGTCGCAACAGCTGACAGAAAAATCTGATGTCTATTCATTTGGGGTTGTTCTTTTGGAAGTGTTGTGTGCAAGAGCAGTGATTGACCCATCTCTTCCAAGAGATCAGATAAACTTGGCTGAATGGGGATTGCTTTGCAAAAACAAGGGGACACTCCAAGAGATCATCGATCCTTCCATCAAGGACCAAATTGATCAAAACTCACTCAGAAAATTTAGTGAGACGATAGAAAAATGTTTGCAAGATGATGGTTCTGATAGGCCAACGATGGGTGATGTGTTGTGGGACTTGGAGTATGCGCTGCAGCTTCAGAGAGGTGCAAATGCAATACAGAGAGAGCCGTACGAGGATAGTTCTAGTAGTGTTTCTGCATCACTTCAGTTGCCCAATGTTCGGCGTCTTCCTTCACTCTCCACACTAAGTGAAATGGATGATACCATTGTGAGGGGTGATGATTCCCATAGTGCTGTGGATTCCGTTTTCTCCCAGTTGGAAATAGACGATGCCAGATAA 2544 0.4328 MEILKRHRIQHSLCVALAFLQFSSLQFPSLGYNVPDKYFINCGSDNSVTESGKVYVGESSLGTSFGSSSNTEKNESSVPSPLYQTARIFRGDSGYKFNIDTNGTYLVRLHFFPFSSPSNLSSARFNVSVPGFWLLQNFTGTNDTNNNSALVKEFFMHITSTSLKITFRPLSSSFAFVNAIELFVLPLHLISDAVARFTPIGGLSTYSGDLYSRVLETKYRLNVGGQATKDMLLRNWIPDDIYLSYPVNAKNHSPYQDQIRYHVGDDSNGPNATRITAPTEVYGTAKETNNISDSARDFGLLNITWALPVENNLDHLLRLHFCDYWNSISGLTYFELSISNAHVMQINSDVNVSNLLPAPYYYDFVVKSDGFGNIRVSLTPNGTAEIPNAFLNGLEIMKVIEQSNSVPPDLESDSSHNSLPVVLGSVLGGLVLVFVMTLLGFLWCFKMRKEKPVENSDWLPIPVNAGGSSHSRLTDITSHGSPLPNINLGLKLSLIDLQLATKNFHASQLIGKGGFGNVYKGVLRNGNIVAVKRSQPGSGQGLPEFQTEIMVLSKIRHKHLVSLIGYCDEKLEMILVYEYMEKGTLRDHLYNTNLPSLSWKVRLQICIDAARGLHYLHKGAAGGIIHRDVKSTNILLDENHVAKVADFGLSRSGPLDPQPYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARAVIDPSLPRDQINLAEWGLLCKNKGTLQEIIDPSIKDQIDQNSLRKFSETIEKCLQDDGSDRPTMGDVLWDLEYALQLQRGANAIQREPYEDSSSSVSASLQLPNVRRLPSLSTLSEMDDTIVRGDDSHSAVDSVFSQLEIDDAR 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04072 847 SMART serkin_6 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04072 847 FunFam receptor-like protein kinase FERONIA 469 579 - -
Spst3g04072 847 Pfam Malectin-like domain 40 399 IPR024788 -
Spst3g04072 847 FunFam Putative receptor-like protein kinase 213 400 - -
Spst3g04072 847 PANTHER OS07G0166700 PROTEIN 491 781 IPR045272 GO:0004714|GO:0006468
Spst3g04072 847 Gene3D - 37 184 - -
Spst3g04072 847 Gene3D - 214 400 - -
Spst3g04072 847 Pfam Protein tyrosine and serine/threonine kinase 506 771 IPR001245 GO:0004672|GO:0006468
Spst3g04072 847 Gene3D Phosphorylase Kinase; domain 1 472 579 - -
Spst3g04072 847 Gene3D Transferase(Phosphotransferase) domain 1 580 798 - -
Spst3g04072 847 ProSiteProfiles Protein kinase domain profile. 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04072 847 SUPERFAMILY Protein kinase-like (PK-like) 481 775 IPR011009 -
Spst3g04072 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Spst3g04072 847 FunFam Receptor-like protein kinase FERONIA 580 797 - -
Spst3g04072 847 CDD STKc_IRAK 510 775 - -
Spst3g04072 847 FunFam Putative receptor-like protein kinase 37 186 - -
Spst3g04072 847 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04072 Spst-Chr3 91670613 91673156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04072 32 847 Receptor kinase-like Gene Family AT2G23200 44.696 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst3g04072 Malectin_like 6.9e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04072 - - gmx:100789555 1132.09