Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04063 ATGAGTCTCTTCTCTCAAGCTCTCACTATTTCACTGCTTCTTCTCGTCACTGTTCACCACTGTTGTGGCCTTAGTAGAGACGGCGTTCTGTTGCTTTCTTTCAAGTACGCTGTGTTGAACGACCCACTTTACGTCCTCGCAAACTGGAACTACAGTGACGAGACACCATGTTCGTGGAACGGCGTTTCTTGTTCCACCGTAGCAGCAACAAACGATTCCGAGTACCGCGTCACATCATTGTCACTTCCCAATTCTCAGCTTTTAGGTTCAATTCCCTCCGATCTGGGTTCCATTCAGCACCTTCAAGTTCTAGACCTTTCCAACAATTCCCTCAACGGTTCTCTTCCTTCTTCGCTCTCCCAAGCCTCTGAGCTTCAGTTCCTCAACCTGTCTAACAATTTAATATCAGGGGAGGTTCCCGAGTCCATAGCGCAGCTTCGGAATCTCCACTTCCTTAACCTCTCCGACAATGCTTTCGCTGGAAAATTGCCTCACGATTTCTCCAACATGCACAACCTAACTCTGGCTTCTTTCAAGAACAATTACTTGTTCGGCTTTCTTCCCAGCGGGTTAACAACGTTGCAGGTTTTGGATCTGTCTTCAAACCTGTTCAACGGGACTCTTCCCGTGGATTTTGGCGGAGACGCCATGCGTTACTTAAACATCTCCCACAACAGATTTTTCGGCCAAATTCCAACGGAGTTCGCGGCAAACATTCCGGGGAACGCCACCGTTGATCTCTCGTTCAACAACCTCACCGGCCAAGTTCCCGACTCCGCCGTGTTTTTGAATCAGAATTGGAAATCTTTCTCTGGTAACGTTAACCTGTGTGGAGAACAGACCAAGAATGTTTGTCCTGTTCCTTCTTCATCGTCCTCTAAACCGAAAGTGTCTGCTCCTATATCTCCTCCTGCAATCGCGGCAATCCCAAAGACGTTTGATTCTTCGGCGGCGCCGAAGGGGCAAAAAGAGAGTGGTCTGAAACGAGGAACGATTATAGGAATCGTGGTGGGAGACGTGGTTGGGATAGGGATCATAGCCATGATATTCATTCAGGTGTACCGGTCGAAGAAAAAAAAGGAGATGGAGGGTGGTGTGAAGAACGAAGCGGTTACGAGGAGTGGGAGCGAGAGTTCATCGGAGTCGAGAGGGTTTATGAGGTGGTCGTGCTTGAGGAAAAGAGCGGAAGAGGAAGAGTGTTCGGAGACAGGAAGCAGTTCTGATAGTGATGTGGAGGGTGCGAAACACGAGGGGCAGACCCATAAGGGTCAGCAACAGGATGACAAAACGGGGACCCTTGTGACTGTGGATGGTGAACGACAGCTAGAACTGGAAACGCTGCTGAAGGCTTCTGTATACATATTGGGTGCCACGGGGTCAAGCATAATGTACAAGGCTGTCCTGGAAGACGGCATGTCGTTGGCGGTTCGGAGAATCGGGGAGAGCGGCGTGGAGCGGTTCAAGGACTTCCAGAACCAGGTTCGACTTATTGCTAAACTGGTGCACCCTAATCTGGTTCGCGTTCGTGGCTTCTATTGGGGACACGACGAAAAGCTCATCATCTATGATTTCGTTCCAAACGGATCCCTTGCCAATGTTCGTTACAGGAAGGTGGGCTCCTCGCCGAGTCACTTGCCGTGGGAAATCAGGCTGAAGATAGCGAAAGGGGTGGCACGTGGGCTGACTTACCTCCACGAGAAGAAACACGTGCATGGAAACTTGAAGCCTAGCAATATTCTACTTGGCAATGACATGGAGCCCAAGATTGGAGACTTCGGGCTTGAGAGGATAGTAACGGGTGACACCAGTTATAAGCCTGGTGGATCCGCGCGTATTTTCGGGAGTAAGAGATACACGGCCTCGAGGGACAGTTTCCAAGACATTACATACGGGCCTAGCCCTAGCCCAAGCCCGAGCCCGAGCTCGATTATGGGTTTCTCCCCTTACCATGCTCCTGAGTCGCTCAGGAACCTGAAGCCTCATCCGAAGTGGGACGTGTACTCTTTTGGGATCATTTTTCTTGAGCTGCTAACGGGGAAGATTGTGGTTTTGGATGATATGGGCCAAGGCCCTGGGGTTTTGATCGAGGATAAGAACCGGGCCTTGCGTATGGTGGATATGTCTATCCGGGCCGACATGGAGGGTAGAGAGGAGGCCATGTTGGCCTATTTCAAACTAGGGTATAGTTGTGTGTCTAGCGTTCCACTGAAAAGGCCTCCAATGAAAGAGGTGCTACAAGCTCTTGAAAAAATCTCCTCCTCTTCTTCCTCCTCCTATTATTATAGCGTCTAA 2292 0.5013 MSLFSQALTISLLLLVTVHHCCGLSRDGVLLLSFKYAVLNDPLYVLANWNYSDETPCSWNGVSCSTVAATNDSEYRVTSLSLPNSQLLGSIPSDLGSIQHLQVLDLSNNSLNGSLPSSLSQASELQFLNLSNNLISGEVPESIAQLRNLHFLNLSDNAFAGKLPHDFSNMHNLTLASFKNNYLFGFLPSGLTTLQVLDLSSNLFNGTLPVDFGGDAMRYLNISHNRFFGQIPTEFAANIPGNATVDLSFNNLTGQVPDSAVFLNQNWKSFSGNVNLCGEQTKNVCPVPSSSSSKPKVSAPISPPAIAAIPKTFDSSAAPKGQKESGLKRGTIIGIVVGDVVGIGIIAMIFIQVYRSKKKKEMEGGVKNEAVTRSGSESSSESRGFMRWSCLRKRAEEEECSETGSSSDSDVEGAKHEGQTHKGQQQDDKTGTLVTVDGERQLELETLLKASVYILGATGSSIMYKAVLEDGMSLAVRRIGESGVERFKDFQNQVRLIAKLVHPNLVRVRGFYWGHDEKLIIYDFVPNGSLANVRYRKVGSSPSHLPWEIRLKIAKGVARGLTYLHEKKHVHGNLKPSNILLGNDMEPKIGDFGLERIVTGDTSYKPGGSARIFGSKRYTASRDSFQDITYGPSPSPSPSPSSIMGFSPYHAPESLRNLKPHPKWDVYSFGIIFLELLTGKIVVLDDMGQGPGVLIEDKNRALRMVDMSIRADMEGREEAMLAYFKLGYSCVSSVPLKRPPMKEVLQALEKISSSSSSSYYYSV 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04063 763 CDD STKc_IRAK 455 751 - -
Spst3g04063 763 MobiDBLite consensus disorder prediction 397 432 - -
Spst3g04063 763 SUPERFAMILY L domain-like 27 278 - -
Spst3g04063 763 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Spst3g04063 763 SUPERFAMILY Protein kinase-like (PK-like) 454 753 IPR011009 -
Spst3g04063 763 FunFam Leucine-rich repeat receptor-like protein kinase 193 287 - -
Spst3g04063 763 ProSiteProfiles Protein kinase domain profile. 449 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04063 763 PRINTS Leucine-rich repeat signature 191 204 - -
Spst3g04063 763 PRINTS Leucine-rich repeat signature 101 114 - -
Spst3g04063 763 FunFam Os07g0541700 protein 525 614 - -
Spst3g04063 763 Gene3D Transferase(Phosphotransferase) domain 1 525 761 - -
Spst3g04063 763 MobiDBLite consensus disorder prediction 362 383 - -
Spst3g04063 763 MobiDBLite consensus disorder prediction 409 424 - -
Spst3g04063 763 Pfam Protein kinase domain 455 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04063 763 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 179 756 IPR046959 -
Spst3g04063 763 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 192 - -
Spst3g04063 763 Gene3D Ribonuclease Inhibitor 25 191 IPR032675 -
Spst3g04063 763 MobiDBLite consensus disorder prediction 625 645 - -
Spst3g04063 763 Gene3D Phosphorylase Kinase; domain 1 411 524 - -
Spst3g04063 763 Gene3D Ribonuclease Inhibitor 192 278 IPR032675 -
Spst3g04063 763 Pfam Leucine Rich Repeat 100 120 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04063 Spst-Chr3 91546351 91548971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04063 6 761 Receptor kinase-like Gene Family AT4G37250 56.266 0.0 812
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst3g04063 Pkinase 6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04063 - - pvu:PHAVU_003G240400g 1214.13