Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04049 ATGCATCGTCCTCCGAAAACGGCAACGACACTGCTCGCTCTGTTGCTATACATGTTGAGGCTGGTCTCTTGCGCTCCCCCGGCGCTCCCCTCCGACGCGGTGGCGTTGCTGTCGTTTAAACAAGAAGCGGACGAAGACAACAAGCTCCTCTACGCGCTGAACGAGCGGTACGACTACTGCGAATGGCAGGGAGTGAAGTGCGCGCAAGGGAGGGTAGTCCGCTTCGTGGTCCAGTCCATGGGCCTGCGCGGCCCATTCCCTCCGGACACCCTCACCAGACTGGACCAGCTCCGGGTTATGAGCCTCCGCAACAACTCCCTCTTCGGGCCCATCCCCGATCTCTCCCCTCTCTCCAACCTCAAGACCCTCTTCCTCGACCACAACAACTTCTCCGGTTCCTTCCCTCCCTCTCTTCTCCTCCTCCACCGCATCCTCACTCTCTCCCTCTCCCACAACAACCTCTCCGGTTCGCTCCCGGTTCGGCTCACTCTCCTCGACCGTCTCATCGCCCTCCGCCTCGATTCCAACAACTTCTCCGGCGCGCTCCCTCCTCTCAACCAAACCGCGCTCAAACTCCTCAACGTCTCCAACAACAACCTCTCTGGTCCTATTCCCGTCACCCCCACCCTCTCTAAACTCAACGCGGCGTCGTTTTCGGGAAACCCTAGTCTCTGCGGGGAGATTGTTCATAGAGAGTGTGACTCACGCTCGCGCTTCTTCGGCCCCGCCACGTCATCCTCCACGGCGCCGTTGAGCCAGAGCGAACAGTCTCAGGGTATTTTGGTTGTGCCTGCTTCCACTAAAACAAAGCGTCATCAAAAGACTGGGCTGGTGGTTGTAGGTTTTGTTGTGGCGGTTGTTCTTGTTAGTGTTTTTGGTGTGGCAGTGGCTTCGTTGGTGAAGAGGAGGCAGACGGCGGTTGGGAAAGCGGTGGTTGTGGAGCGGGGTGAGGTGGAGGGAGGTGTGGAGGAGGGGGAGAAGGAAGTGAAGGTGAGGAGGATGGAGGAGGCGCACAGGAGTGGGAAGCTGGTGTTCTGCTGCGGGGAGGTGCAGCAGTATACACTGGAGATGCTGATGAGGGCTTCGGCGGAGTTGCTGGGGAGGGGAAGCGTGGGGACGACGTACAAGGCGGTGCTGGATTCGCGGCTGATTGTGACGGTGAAGAGGTTGGATGGGAGGAAGAGTGAGGGGAGCGATGGGGCCGTGTTTGAGCGCCACATGGAGGCTGTGGGGAGGCTTCGTCACCCCAATTTGGTGCCGTTGAGGGCTTATTTTCAGGCCAAGGGAGAGAGGCTTGTCATATATGATTATCAGCCCAATGGAAGCCTCTTCAACCTCGTTCACGGTTCAAGATCGGCGAGGGCGAAGCCTTTGCATTGGACCTCATGCTTGAAAATAGCCGAAGATGTGGCACATGGACTTGCTTATATACATCAAGTTTCATCTCTAATTCATGGCAACCTAAAATCCTCTAACGTCCTTCTTGGGACGGACTTTGAAGCTTGTATTACGGACTATTGTTTAGCCTTATTTGCGGATTCTTCGTTCTCTGAAGATCCCGATTCAGCGGCTTATAAAGCACCCGAGGCTCGCAACTCTAGCCGCAGGGCCACTTCCAAGTCTGACGTGTACGCTTTTGGTGTGCTTCTACTGGAGCTTTTGACGGGTAAACACCCTTCCCAACACCCTTTTCTTGCACCAGCGGATTTGCAAGATTGGGTGAGAGCAATGAGGGATGATGATGGCAGTGAGGACAACCGCTTAGAGATGCTCACCGAGGTTGCCAGTATTTGCAGTGCTACCTCGCCGGAGCAGAGGCCAGCAATGTTGCTAGTCCTAAAGATGATACAGGGAATTAAGGACAGCGTTTCCATGGAGGATACTTCATTTACTAGACTCTCATAG 1905 0.5564 MHRPPKTATTLLALLLYMLRLVSCAPPALPSDAVALLSFKQEADEDNKLLYALNERYDYCEWQGVKCAQGRVVRFVVQSMGLRGPFPPDTLTRLDQLRVMSLRNNSLFGPIPDLSPLSNLKTLFLDHNNFSGSFPPSLLLLHRILTLSLSHNNLSGSLPVRLTLLDRLIALRLDSNNFSGALPPLNQTALKLLNVSNNNLSGPIPVTPTLSKLNAASFSGNPSLCGEIVHRECDSRSRFFGPATSSSTAPLSQSEQSQGILVVPASTKTKRHQKTGLVVVGFVVAVVLVSVFGVAVASLVKRRQTAVGKAVVVERGEVEGGVEEGEKEVKVRRMEEAHRSGKLVFCCGEVQQYTLEMLMRASAELLGRGSVGTTYKAVLDSRLIVTVKRLDGRKSEGSDGAVFERHMEAVGRLRHPNLVPLRAYFQAKGERLVIYDYQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQVSSLIHGNLKSSNVLLGTDFEACITDYCLALFADSSFSEDPDSAAYKAPEARNSSRRATSKSDVYAFGVLLLELLTGKHPSQHPFLAPADLQDWVRAMRDDDGSEDNRLEMLTEVASICSATSPEQRPAMLLVLKMIQGIKDSVSMEDTSFTRLS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04049 634 Gene3D Ribonuclease Inhibitor 30 186 IPR032675 -
Spst3g04049 634 Gene3D Ribonuclease Inhibitor 187 236 IPR032675 -
Spst3g04049 634 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 622 IPR046959 -
Spst3g04049 634 SUPERFAMILY Protein kinase-like (PK-like) 364 620 IPR011009 -
Spst3g04049 634 Gene3D Transferase(Phosphotransferase) domain 1 439 631 - -
Spst3g04049 634 SUPERFAMILY L domain-like 28 226 - -
Spst3g04049 634 Pfam Protein kinase domain 363 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04049 634 FunFam Probable inactive receptor kinase At5g67200 31 141 - -
Spst3g04049 634 ProSiteProfiles Protein kinase domain profile. 360 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04049 634 Gene3D Phosphorylase Kinase; domain 1 315 437 - -
Spst3g04049 634 FunFam Leucine-rich repeat receptor-like protein kinase 143 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04049 Spst-Chr3 91431887 91434748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04049 29 627 Receptor kinase-like Gene Family AT3G50230 53.968 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst3g04049 Pkinase 4.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04049 - - gmx:100783086 954.51