Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04047 ATGGAAATATCGGAGAATTGCTCTGTCAAAGTCGCTCTTCACATTCGTCCTCTCATTTCCGATGAACGACAGCAAGGTTGCATTGAATGTGTTTCCGTCACGCCAGGGAAACCTCAGGTCCAAATTGGGTCACATTCCTTTACTTTTGATTATGTCTATGGAAATGGTGGATCTCCTTCTGTTGACATGTTTGAGGAATGCATTGCTCCATTGATTGATGGCTTATTCCAGGGATATAATGCTACAGTACTTGCCTATGGTCAGACAGGATCTGGGAAAACGTATACCATGGGGACTGGCTATAATGACAATTGTCGGACTGGATTAATTCCTCAGGTTATGAATGCCTTATTCAATAAAGTTGAAACACTAAAGCATCAAGCAGAATTTCAGTTGCGAGTCTCCTTCATTGAGATTTTGAAGGAAGAGGTCAGGGACCTGTTGGATATGGTATCTATGGGCAAATCAGACACCTCTAACTCTAATGGCCATTCTGGAAAAATAACTTTTCCTGGGAAACCATCAATACAAATCCGTGAAACAGCAAATGGAATAATAACACTTGCAGGAATAACTGAAGTTGCTGTAAGTACATTACATGAGATGTCTGCATACTTGGAGCAAGGTTCTTTAAGTAGGGCAACAGGAAGTACAAATATGAACAACCAGTCCAGTCGGTCGCATGCCATTTTCACAATTACATTAGAACAAATGCACAAGCTCCACTTTGTTTCTACCACCAATGACTCGTCAGATGAGGATATGGGTGAAGAATACCTTTCAGCAAAGCTCCATTTAGTAGATCTAGCTGGATCTGAACGAGCTAAAAGAACAGGTTCTGACGGTCTTCGTTTGAAAGAAGGCATACACATCAATAAAGGTCTTCTTGCTCTTGGTAACGTCATAAGTGCACTGGGGGATGAAAAAAAGCGGAAGGAAGGTGTGCATGTTCCTTATCGTGATAGCAAACTCACTCGACTCTTACAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATAAGTCCTGCCGATGTCAATGCCGAGGAAACCCTTAACACTCTCAAGTATGCAAACCGTGCTCGCAATATTCAAAATAAGCCCGTTGTTAATCGAGATCTAATATCTGATGAGATGCAACAAATGCGCCAGCAGTTGAAGTACTTGCAGGCTGAACTCTGTTCTCGGGGAGCAGCTCCTGTCGATGAAGTGCGGGTTCTTAAGGAAAGGATTGCTTGGCTTGAGGCAACTAATGAGGACCTTTACAGAGAACTTCATGAATATCGCAGTAGATGTGCTTTTGTAGGGAGATGTGAAATCGATGAACCGGCAGATGGAAACATTTATCTCATGAAAGCTGATGGGCTTGAGAGACCCTTTCAGAGCTTAGATTCATCTGACCATCCCATGGTTGGAAGTATATCAGGTGATGATTCAAAGGAAACTGATGAAGCGGCAAAAGAGTTGGAGCATGTGCTATTACAAAATACCATGGATAAAGAGATGAATGAGTTGAATAAGCGATTGGAGCAGAAAGAGTCTGAGATGAAGCTCATTGCAGTTGATACTGAGGCACTTAAACAACACTTCGGGAAGAAAATTCTGGAACTTGAGGAGGAGAAAAGGAAAGTTCAGGAAGACAGGGACAGATTATTGCATGAGGTACAGAATCTTTCTGCTAATTCAGATGGACTAGCACACAAAACACTAGATGTTCGAGGCCAAAAGTTGAAAGCTTTGGAAGCACAGATTTTAGACCTGAAGAAGAAACAAGAAAGCCAGGTGCAATTATTAAAGCAAAAGGAGAAGAGTGAAGAAGCTGCAAAAAGACTGCAGGCTGAGATACAGTATATCAAGGCTCAGAAGGTTCAGTTGCAGCATAAAATTAAACAAGAATCTGAACAATTTCGACAATGGAAAGCTTCTCGGGAGAGGGAGCTGCTCCAGAGGAGTTTCAATGTGCCTTACTGTGATCAATTTGAGGCCCTATTGAGCACACCCTTCAATATCTGTGCTATGTCTCAAAGCATATGGCACGCCGGATTTTTGTTGAATGTTTTGAAAAAGGAGGGAAGAAAGAACGAGTATGAACGACATAAACTTGAGGCTCTAAACCATCGCCAGAAAATGGTTCTTCAAAGGAAGACAGAGGAAGCAACAATGGCTACAAAAAGGCTAAAAGAATTGTTGGAAGCCCGCAAATCTTCCCCCCGTGACAACTCTGTTTATTCAAATGGACATCTACATCAAGGGCTGGTCAATGAAAAATCCCTCCAGAAGTGGCTTGATCAGGAGCTGGAGGTCATGGTACACGTGCATGAAGTTCGTGCTGAATTTGAAAATCAAAATCAAGTACGAGCTGCAATGGAAGAAGAGTTGGCTTTATTAAAGCACGATCAGTTTTCAGATGGGCAGAGTATTCCCATAGGAAAGAGCAGATATTTGAGGCTGTTATCCATGTCGCCAGATGCAAAAGTTGAGAGAATAGCTTCTCTTGAGAACATGCTGTGCATGTCTTCAGTTGCTTTGAAAGCCATGGCTTCACAGCTTACTGAGGCAGAAGAAAGGGAACGCACGTTAAACAACCGTGGTCGTTGGAACCAGCTACGCTCAATGGGAGATGCAAAGAATGTGCTTCAGTATTTGTTCAATGCTATTGTAGAAGCAAGGTGCCAATTGTTGGAAAAGAATATGGAACTTAAGGATTTGAAAGAGCAACTAAATGAGCTTGTAGCACTACTACAACAAAGTGAAGCCCAAAGAAAAGAACTTGTAAAGGAGCAAAAAATAAGGGAACAAGCTTTTGCCAACACATTGAATACACCGTCATTGGAAAATTCACGGTCCTTGAAACACCTTGCGGATGAAATGAGTGGTCCGTTGTCTCCAATGTCACTTCCTGCACCAAAGCAACTCAAGTTCACCCCTGGAGTTGTTAATGGGTCTGTCATGGAGTCGGCTACTTTTTTAGATGAAGCACGAAAGATGATACCAATTGGGGAGTTGTCAACAAAGAGGCTAGCAGCTATGGGACAAGCCGGAAAACTTTGGAAGTGGAAGAGAAGTCATCATCAATGGCTGATACAATTTAAATGGAAGTGGCAGAAGCCCTGGAAACTCTCAGAATGGATCAAACATAGTGATGAGACAATTATGAGGTCAAGGCCTCGAGCACAAGCTTTAATTAATGTGATATGA 3207 0.4228 MEISENCSVKVALHIRPLISDERQQGCIECVSVTPGKPQVQIGSHSFTFDYVYGNGGSPSVDMFEECIAPLIDGLFQGYNATVLAYGQTGSGKTYTMGTGYNDNCRTGLIPQVMNALFNKVETLKHQAEFQLRVSFIEILKEEVRDLLDMVSMGKSDTSNSNGHSGKITFPGKPSIQIRETANGIITLAGITEVAVSTLHEMSAYLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMHKLHFVSTTNDSSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGLRLKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADVNAEETLNTLKYANRARNIQNKPVVNRDLISDEMQQMRQQLKYLQAELCSRGAAPVDEVRVLKERIAWLEATNEDLYRELHEYRSRCAFVGRCEIDEPADGNIYLMKADGLERPFQSLDSSDHPMVGSISGDDSKETDEAAKELEHVLLQNTMDKEMNELNKRLEQKESEMKLIAVDTEALKQHFGKKILELEEEKRKVQEDRDRLLHEVQNLSANSDGLAHKTLDVRGQKLKALEAQILDLKKKQESQVQLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKIKQESEQFRQWKASRERELLQRSFNVPYCDQFEALLSTPFNICAMSQSIWHAGFLLNVLKKEGRKNEYERHKLEALNHRQKMVLQRKTEEATMATKRLKELLEARKSSPRDNSVYSNGHLHQGLVNEKSLQKWLDQELEVMVHVHEVRAEFENQNQVRAAMEEELALLKHDQFSDGQSIPIGKSRYLRLLSMSPDAKVERIASLENMLCMSSVALKAMASQLTEAEERERTLNNRGRWNQLRSMGDAKNVLQYLFNAIVEARCQLLEKNMELKDLKEQLNELVALLQQSEAQRKELVKEQKIREQAFANTLNTPSLENSRSLKHLADEMSGPLSPMSLPAPKQLKFTPGVVNGSVMESATFLDEARKMIPIGELSTKRLAAMGQAGKLWKWKRSHHQWLIQFKWKWQKPWKLSEWIKHSDETIMRSRPRAQALINVI 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04047 1068 PRINTS Kinesin heavy chain signature 317 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g04047 1068 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g04047 1068 PRINTS Kinesin heavy chain signature 263 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g04047 1068 PRINTS Kinesin heavy chain signature 218 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g04047 1068 Coils Coil 375 395 - -
Spst3g04047 1068 Coils Coil 498 525 - -
Spst3g04047 1068 ProSitePatterns Kinesin motor domain signature. 262 273 IPR019821 GO:0003777|GO:0005524|GO:0007018
Spst3g04047 1068 Pfam Kinesin motor domain 20 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g04047 1068 ProSiteProfiles Kinesin motor domain profile. 8 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g04047 1068 CDD KISc_KIF4 7 368 - -
Spst3g04047 1068 Coils Coil 775 802 - -
Spst3g04047 1068 SMART kinesin_4 6 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g04047 1068 Coils Coil 580 631 - -
Spst3g04047 1068 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1057 IPR027640 GO:0003777|GO:0007018
Spst3g04047 1068 Coils Coil 715 735 - -
Spst3g04047 1068 Coils Coil 889 930 - -
Spst3g04047 1068 FunFam kinesin-like protein KIN-4A isoform X1 2 395 - -
Spst3g04047 1068 Gene3D Kinesin motor domain 1 395 IPR036961 -
Spst3g04047 1068 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 398 IPR027417 -
Spst3g04047 1068 Coils Coil 846 866 - -
Spst3g04047 1068 Coils Coil 407 434 - -
Spst3g04047 1068 Coils Coil 530 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04047 Spst-Chr3 91417688 91428048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04047 9 400 Calmodulin-binding Proteins AT5G65930 34.257 6.85e-55 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04047 - - gmx:100790341 1825.45