Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04037 ATGCAAGCGCTTTTAACTCTCCTTTGGCGCGCTGTGACACGTTGCAAACTCGTCGACCCGCAAGAAAAGGTGCATTATGTGTTGTTCGTTGGCGTTTGGTCGAGGATGGTTCCACCACTGACAGAGGGTTATTTTGGAAACTCGGTGATAGCTACTATTGTCACCATGAGAGCGGGGGAACTATTGGAGGGTGGGCTTGCAAAGGGTGCTTTGGAGATGAACAAGGTGATTTCTTTGCACTCTGGTGAGAAGATAAAGAACCACTATGAATCTTGGATGAGAAGGCCAAGGCTGTTAATGTTGCCGAGTGGCGTGGCTGGTAGTAGTTACTTGATCACTAGCAGTTCCCCAAGGTTCAACATAATGGGTAATGATTTTGGTTGGGGAAAGCCTGAAGCAGTTCGAATTGGAGGTGGCAATGAACGAAACAGCATGATTACTCTGTTTGGTGGCGCTGAAGAAGGCTCCATTGACATTGTAGTGGACCTTCCTTATTGGATTTTGGAGGCCTTGGGAAACGACGCAGAGTTCATGGACGTTGTGTCCAACTAA 552 0.4764 MQALLTLLWRAVTRCKLVDPQEKVHYVLFVGVWSRMVPPLTEGYFGNSVIATIVTMRAGELLEGGLAKGALEMNKVISLHSGEKIKNHYESWMRRPRLLMLPSGVAGSSYLITSSSPRFNIMGNDFGWGKPEAVRIGGGNERNSMITLFGGAEEGSIDIVVDLPYWILEALGNDAEFMDVVSN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04037 183 Gene3D - 1 173 IPR023213 -
Spst3g04037 183 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 178 - -
Spst3g04037 183 Pfam Transferase family 2 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04037 Spst-Chr3 91199572 91200123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04037 8 163 Monolignol Biosynthesis Gene Families AT5G48930 26.415 1.06e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04037 - - vun:114175486 238.424