Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04036 ATGGAAGGCGTCCAAGTCATCTCCACTACCACAATCAAAGCACCACCTACTCACACTCACACTCACACTCACACTACCCGTAACGCACCTCAAAACATCCACTTAACTCCCTGGGATCTTCAATTCCTCCCCGTTCAATACATCCAAAAAGGAATTCTTTTTTCCACCCAAAAACACACACCAATCCAAATCCACCATCTCCAACACTCCCTTTCCTCAACTCTTGCCTTCTTTCCCCTCCTCGCAGGTCGTCTTGTCATTCTCCATCACAGCAACGCTGTCTCATCCCACATCCTATGCAACAACGCTGGTGTCCTCTTTGTCCACGCCGTTGCACACAACACCACCCTCGCTCACATCCTTCAACCCAAATACGTTCCTCCCATTGTTCAATCCTTCTTTTCACTCAACGGCGTTAAAAACTACGAGGGTACTTCACAGCCACTGCTGGCAGTGCAAGTGACGGAGCTGCTTGACGGCGTCTTCATCGCCTTCACAATCAACCACGTCGTTGCTGACGGCAAGTCCTTGTGGCGTTTCGTGAATTCGTGGGCTGAAATCTCACGTGGCTCCCTTCAAATATCCGAACTCCCATCTCTCCAACGTTACTTTCCCGATGGCATTCACCACCCCATACACTTTCCATTCACAGAGGAAGAAGAAAAACAACACTCCCCAAACCTCAAACCACAAACTCTACCTGAGAGGATCTTCCATTTCACGAAGGAAAAAATCGCGGAACTGAAATCAAAAGCCAACGCAGAGGCCAACACCTGCAAAATATCTTCTCTGCAAGCTCTTTTAACTCTCCTTTGGCGCTCTGTGGTTCGTTGCCAACACTTGGAGCCACAACAAGAGGTTAGGTACGTGCTGCTGATTGGAGCTAGACCCAGAATGGTTCCACCCCTGGGAGAAGATTATTTTGGAAACGCGTCGTTGGTTGGTGTTGTCACCATGAAAGCTGGGGAGCTATTGGAAGGTGGGATTGGAAAGGGTGCTTTGGAGATAAACAAGATGATTTCTTTGCACTCTCATGAGAAGATAGAGAACCACTATGAGTCTTGGGTGAGAACTCCTACGCTGATAACGATGGGCCTGGCTTCTAGTACATCGTTGGCCATTAGCAGTTCTCCCAGGTTCAACGTTTACTGTAATGATTTTGGGTGGGGAAAGCCCGTGGCAGTAAGAAGTGGCAGCGCAAATAAGACTAACGGAAAGATTAGTCTGTTTGCTGGCGCCGAAGAAGGTTCTATGGACATTGAAGTGTGTCTCGCCTACGAGATTTTGGAGGCAATCGGAAGTGACCCCGAGCTCATGGACGCCATTTCCAACTAG 1335 0.4869 MEGVQVISTTTIKAPPTHTHTHTHTTRNAPQNIHLTPWDLQFLPVQYIQKGILFSTQKHTPIQIHHLQHSLSSTLAFFPLLAGRLVILHHSNAVSSHILCNNAGVLFVHAVAHNTTLAHILQPKYVPPIVQSFFSLNGVKNYEGTSQPLLAVQVTELLDGVFIAFTINHVVADGKSLWRFVNSWAEISRGSLQISELPSLQRYFPDGIHHPIHFPFTEEEEKQHSPNLKPQTLPERIFHFTKEKIAELKSKANAEANTCKISSLQALLTLLWRSVVRCQHLEPQQEVRYVLLIGARPRMVPPLGEDYFGNASLVGVVTMKAGELLEGGIGKGALEINKMISLHSHEKIENHYESWVRTPTLITMGLASSTSLAISSSPRFNVYCNDFGWGKPVAVRSGSANKTNGKISLFAGAEEGSMDIEVCLAYEILEAIGSDPELMDAISN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04036 444 MobiDBLite consensus disorder prediction 1 29 - -
Spst3g04036 444 Pfam Transferase family 31 439 - -
Spst3g04036 444 Gene3D - 2 212 IPR023213 -
Spst3g04036 444 Gene3D - 215 433 IPR023213 -
Spst3g04036 444 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04036 Spst-Chr3 91178410 91179744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04036 67 427 Monolignol Biosynthesis Gene Families AT5G48930 26.842 1.58e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04036 - - gmx:100500257 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04036 3 91178410 91179744 Spst3g04036 3 91178410 91179744 ECH