Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04033 ATGGCTAACGAACAGGAACAGAAAAACAACTTCTTCGGCGTCAAAGATCTTTCTCATAAGACTCTCCTTCAGAGCGATGCACTCTATCAGTATATACTTAAAACCAGTGTTTATCCAAGAGAGCACGAGTGCTTGAAGGAGCTCCGCGAGATGACAGAAAAACACCCCCGGAACCTGATGGCTACACCACCCGACGAAGGGCAACTTCTGAGCATGCTTGTGAAGCTCATTAATGCCAAGAACACCTTGGAAATTGGTGTATACACTGGTTATTCTCTTCTCTCCACTGCCCTGGCTCTTCCCGCTGATGGAAAGATCTTGGCTTTGGACATGAACCGCGAATACTATGAATTAGGATTGCCCATAATTGAAAAAGCTGGTGTGATTGATAAGATAGACTTCAGAGAAGGACCTGCTCTTCCTTTTCTCGATGAGCTGCTTCAAGATGAAAATAACAAAGGAAAGTTCGATTTCGTTTTCGTGGATGCTGACAAGAACAATTACTTGAACTATCACAAGAGGGTAATTGAGCTGGTGAAAGTTGGAGGGCTGATCGGATACGACAACACGCTATGGGCTGGATCTGTGGTGGCGCCGCCTGATGCACCGATGATGGATTACATTAAGCCTCTTCGCAGCTATGTGATGGAGCTCAACAAGTACCTGGCTCAAGATTCAAGGATTGAGATTTGCCAGCTCCCAGTGGGTGATGGGGTTACCCTCTGCCGCCGCATCTTCTGA 741 0.4656 MANEQEQKNNFFGVKDLSHKTLLQSDALYQYILKTSVYPREHECLKELREMTEKHPRNLMATPPDEGQLLSMLVKLINAKNTLEIGVYTGYSLLSTALALPADGKILALDMNREYYELGLPIIEKAGVIDKIDFREGPALPFLDELLQDENNKGKFDFVFVDADKNNYLNYHKRVIELVKVGGLIGYDNTLWAGSVVAPPDAPMMDYIKPLRSYVMELNKYLAQDSRIEICQLPVGDGVTLCRRIF 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04033 246 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 244 IPR029063 -
Spst3g04033 246 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 21 245 IPR002935 GO:0008171
Spst3g04033 246 PANTHER O-METHYLTRANSFERASE-RELATED 18 245 - -
Spst3g04033 246 Pfam O-methyltransferase 35 245 IPR002935 GO:0008171
Spst3g04033 246 Gene3D Vaccinia Virus protein VP39 10 246 IPR029063 -
Spst3g04033 246 FunFam Caffeoyl-CoA O-methyltransferase 1 14 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04033 Spst-Chr3 91125938 91127071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04033 4 245 Monolignol Biosynthesis Gene Families AT4G34050 71.901 3.62e-131 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04033 K00588 - gmx:100305498 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04033 3 91125938 91127071 Spst3g04033 3 91125938 91127071 ECH
Spst3g04033 3 91125938 91127071 Spst3g04033 3 91125938 91127071 PCT