Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04025 ATGGATTGGATTCGAGGAGACGCCGTTGGTCGAGGAACCTTCGCCACCGTTAGTTTAGTCATTCCGACAACCACTCCCTCTCAGTTTCCCTCTCTGACCGCCGTTAAGTCCTCCCAAGCACTCACCTCCTGCTGGCTCAGGAACGAGAAACACGTGCTCGATCGCCTAGGTTTGTGTCCCAGGATCGTTCGCTGCTTCGGAGACGACTATAGTTTCGAGAATGGTGTGGAGTACTACAATTTGTTTCTCGAATACGCCGCCGCCGGGACACTCGCCGACGAGGTACAAAATCGAGGAGGCCGGATTCCTGAGTCTGAGGTTCGGCGTTACACGAGGTCCATCGTGGAAGGTTTGAATCACGTGCATCAAAACGGGTTTGTCCACTGCGACATAAAGCTTCAAAACATCCTCGTATTCGACGACGGGGAAATCAAGATTGCGGATTTCGGTCTGGCAAAGGAGGCAGGGGAGAGAAAACAGAGGAGTGAATGCAGGGGGACTCCGATGTTTATGTCCCCGGAGCAAGTGGCCGATGGCGAGTGTGACTCGCCGGCGGATATATGGGCTCTGGGATGCGCCGTTGTGGAGATGGTGTCAGGGAAACCGGCCTGGCAGGTGGAGAAGGGGTCGAGTATGTGGTCGTTGATGCTTCGAATTGGGGTGGGAGAAGAGGTTCCCGAGATACCTGAGAATTTGTCGCGAGAGGGTAAGGATTTTATCGACAAGTGTTTCGTGAAGGATCCTAAAAAGAGGTGGAGTGCAGAGATGCTTTTGAAACACCCTTTTGTTTCTGATGACACTGTTTCATTTAAGCGCGTTCATGAATCGCCCAGAAGTCATTTCGATTTCCCCGACTGGGTTTCTAGTGCCACGGCTTCACTTCCCAGTTCGCCGGAATCTCAATCGCCGTGGAATTTTGACGAGTCGCGTTTGGAAGGTTTCTGCTCGCCGGAGGACCGGCTCGGGCGGATTTTGACGGTTAACCGGCCGGCGAGTTGGTCGGAATCAGATGGTTGGAGTATTGTTAGGTGA 1032 0.532 MDWIRGDAVGRGTFATVSLVIPTTTPSQFPSLTAVKSSQALTSCWLRNEKHVLDRLGLCPRIVRCFGDDYSFENGVEYYNLFLEYAAAGTLADEVQNRGGRIPESEVRRYTRSIVEGLNHVHQNGFVHCDIKLQNILVFDDGEIKIADFGLAKEAGERKQRSECRGTPMFMSPEQVADGECDSPADIWALGCAVVEMVSGKPAWQVEKGSSMWSLMLRIGVGEEVPEIPENLSREGKDFIDKCFVKDPKKRWSAEMLLKHPFVSDDTVSFKRVHESPRSHFDFPDWVSSATASLPSSPESQSPWNFDESRLEGFCSPEDRLGRILTVNRPASWSESDGWSIVR 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04025 343 FunFam Mitogen-activated protein kinase kinase kinase 17 2 290 - -
Spst3g04025 343 SUPERFAMILY Protein kinase-like (PK-like) 3 303 IPR011009 -
Spst3g04025 343 Gene3D Transferase(Phosphotransferase) domain 1 2 297 - -
Spst3g04025 343 CDD STKc_MAPKKK 2 263 - -
Spst3g04025 343 SMART serkin_6 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04025 343 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 282 - -
Spst3g04025 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Spst3g04025 343 ProSiteProfiles Protein kinase domain profile. 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04025 343 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Spst3g04025 343 Pfam Protein kinase domain 7 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04025 Spst-Chr3 90975224 90976255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04025 1 343 MAP Kinase Kinase Kinase AT4G36950 53.143 9.29e-117 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst3g04025 Pkinase 1.3e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04025 - - gmx:100798607 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04025 3 90975224 90976255 Spst3g04025 3 90975224 90976255 ECH
Spst3g04025 3 90975224 90976255 Spst3g04025 3 90975224 90976255 PCT