Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04006 ATGGAGATGGCTCAGGTGAAGACACGAGCTCGAACTGCATTGGCCGTTGGAGCTTCTGCAACTTCACCGAAGAGAAGAAGAACCGCTGTCAACAACAACAGCAACAACATCTCACCATCCTCCTTCGTTCAACTCAAGAGTTTGAGTAATACATCCGCGCCAGAAACGGAGGAACGCTGTTCCGGCGAATCTTCGGCGTCGTGTTGTTCCAGCAACGGATCCTTCGACGAAAACCGAATCATCAAATTTTCAGATCTAGAGGTAGAGAACGCGCAAGTGGAAATGCCGACGTGCAGTTGCGGTGAACAACAAACAAGGAGAGAGATGAGTCTATCGAGCGAGCTTCGAATTACAAATTCGCAGGAGGTGGACTCAGCGGAGAAGAAGAAGCCAACGACGCAGTCCAAAACCAAATCTCGCCATGTTTCATCAGCGGCGCAGAAAATGCCGACGGAGTCGGAGCTCGAAGAATTCTTCGCCGCCGCGGAGAAAGACATTCAGAAAGTCTTCTCAGAAAAGTATAATTATGATATTGTGAAGGACGTGCCCTTGGAAGGACGATACGAGTGGGTGAAATTGAAGCCATAA 588 0.4915 MEMAQVKTRARTALAVGASATSPKRRRTAVNNNSNNISPSSFVQLKSLSNTSAPETEERCSGESSASCCSSNGSFDENRIIKFSDLEVENAQVEMPTCSCGEQQTRREMSLSSELRITNSQEVDSAEKKKPTTQSKTKSRHVSSAAQKMPTESELEEFFAAAEKDIQKVFSEKYNYDIVKDVPLEGRYEWVKLKP 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04006 195 MobiDBLite consensus disorder prediction 99 120 - -
Spst3g04006 195 PIRSF CKI_KRP_plant 1 195 IPR044275 GO:0004861|GO:0045736|GO:0051726
Spst3g04006 195 Gene3D p27 147 195 IPR044898 -
Spst3g04006 195 MobiDBLite consensus disorder prediction 1 75 - -
Spst3g04006 195 Pfam Cyclin-dependent kinase inhibitor 149 193 IPR003175 GO:0004861|GO:0005634|GO:0051726
Spst3g04006 195 MobiDBLite consensus disorder prediction 99 150 - -
Spst3g04006 195 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 4 194 IPR044275 GO:0004861|GO:0045736|GO:0051726
Spst3g04006 195 MobiDBLite consensus disorder prediction 24 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04006 Spst-Chr3 90744858 90745956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04006 81 195 Core Cell Cycle Gene Families AT1G49620 42.241 3.56e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04006 - - ccaj:109818608 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04006 3 90744858 90745956 Spst3g04006 3 90744858 90745956 ECH
Spst3g04006 3 90744858 90745956 Spst3g04006 3 90744858 90745956 PCT