Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03986 ATGCGGTGGTTACCCACGCTTTCCTTCTCGCCTTCGAGTTCCTCGTCGTCCGCCGCTGCCGTCGACAACCGCCGGAAGGCTTGGTTATTCGGAACTTCGTCCAAGAAGCGCGCCTGCCAAGTTGTCGGCGAGCAAGATGCCAGGTGGCACGACGACGATTCCCTCGGCACGCCTCACCCCTTGCCCTTGCCGGAGCTCGCCGCCTCCCCCACTGCGCTCCGTGGCAGAGACGGCAAGTGTCGTCTTCCCTCGCCCAAGGACCCTGCTATTCGCGCCGCCACCACCGGCTTTCGGATGCGGAGTGTTTTTGCTAGTCAAGACACGAGAAGGAATGTGGAGCAGCCTGAAACTAGGTCATCGGGAATGGTGCATCAAGATGCGAGTGGTTGTGGTGAGAGTGCTCGAGATAATAGTAATAGTAATAATGATAACTTGGTGAGCGTTCCTCGTAGGAGGAGTATTTCAGGTAGTCCTTTTGCAAGTCCTACAATGAGTCCCCAGATTACAAGGAATGGTGATTTTGTCCCATATTATTATGCGAGTCCCAAAGGAAATCAGTTCTGGTCTGCACCTGAAACGTCTATCTGTGAAACAGGGTTGGTACCTCCTGCCTTCTTTGATTTATCCGTCTTAGGAACAGAAGCTTCTCCTTCTCCCACCTCCCATCAAAGTCCACAGAGGAAAAGTCCCAAGAAACACGCCAGAGCCTTGAGTGGACCTCCATCCCCGATATATTCCAAGTTATTACTTGAAATCTCAACGATGCGCCGTGAAAGTAATGCTCCTCCTGTCAGTGTTCACCCCTTGCCCCTGCCTCCAGGGGCTGCCTTGTCCTCTCCACCAGCTACTGGTACCTTTTCCCATGTTAGGTCAGAATCATTGCCAATGAAAAACCAATGGCAGAAAGGGAAACTTATAGGGCGTGGGACATTTGGAAGTGTTTATGTTGCAACCAATAGGGAAACTGGAGCATTATGTGCAATGAAGGAAGTAGAAATATTTCCTGGTGATCCAAAATCTGCTGAGTGTACAAAACAGTTAGAACAGGAAATTAAAGTTCTTAGCCAGCTAAAAAATTCAAACATTGTGCAGTATTATGGCAGCGAAATAGTTGGGGACCGGTTTTACATTTATCTGGAATATGTTCATCCTGGTTCAATTAATAAATATGTTCGTGAACATTGTGGTGCCATAACAGAATCTGTCATTCGGAATTTCACTCGCCATATTCTATCAGGGTTGGCTTATTTACATAGCAAAAAAACAATTCATAGGGACATCAAAGGAGCTAACTTGCTTGTTGACTCTGCTGGAGTTGTTAAGCTTGCTGATTTTGGAATGGCTAAGCATCTAAATGGTTTCGAAGCTAATCTTTCTTTGAGGGGAAGTCCATACTGGATGGCTCCAGAGGCTGTGATGCAAAAGGATAAGAGTCCTGATCTTGCTTTTGCTATTGATATTTGGAGTTTGGGTTGTACCATCATTGAAATGTTCACAGGGAAGCCTCCTTGGAGTGAATATGAAGGAGCTGCAGCTCTTTTTAAGGTTATGAAGGAAACCCCTCCTATACCTGAAACACTGTCACCTGAGGGTAAAGATTTCTTGAGGTGCTGCTTTAAAAGAAATCCGGCAGAGCGACCAACGGCTGCAGTTTTACTAGAGCATCGATTTTTGAAAAACTCTCAACAGCCTGATGTTTTATCTCCCACTAAGCTGTATAATGGAACAAGCCTCCTGGACAAACCACATAGTCCCATTAAACAATCTGAATATAAACATGATCAGTTGTCAATCTCCTGTGCAAACATTGCCAAGGGTAAAGCAGCTGACAGGCGTGGATTTCTCATTCCTTCGTTAGATATTCTTCCTGCATACTTGGGCCAATAA 1887 0.4642 MRWLPTLSFSPSSSSSSAAAVDNRRKAWLFGTSSKKRACQVVGEQDARWHDDDSLGTPHPLPLPELAASPTALRGRDGKCRLPSPKDPAIRAATTGFRMRSVFASQDTRRNVEQPETRSSGMVHQDASGCGESARDNSNSNNDNLVSVPRRRSISGSPFASPTMSPQITRNGDFVPYYYASPKGNQFWSAPETSICETGLVPPAFFDLSVLGTEASPSPTSHQSPQRKSPKKHARALSGPPSPIYSKLLLEISTMRRESNAPPVSVHPLPLPPGAALSSPPATGTFSHVRSESLPMKNQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVEIFPGDPKSAECTKQLEQEIKVLSQLKNSNIVQYYGSEIVGDRFYIYLEYVHPGSINKYVREHCGAITESVIRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLNGFEANLSLRGSPYWMAPEAVMQKDKSPDLAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAALFKVMKETPPIPETLSPEGKDFLRCCFKRNPAERPTAAVLLEHRFLKNSQQPDVLSPTKLYNGTSLLDKPHSPIKQSEYKHDQLSISCANIAKGKAADRRGFLIPSLDILPAYLGQ 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03986 628 SMART serkin_6 300 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03986 628 ProSiteProfiles Protein kinase domain profile. 300 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03986 628 Gene3D Transferase(Phosphotransferase) domain 1 296 594 - -
Spst3g03986 628 SUPERFAMILY Protein kinase-like (PK-like) 291 585 IPR011009 -
Spst3g03986 628 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 104 571 - -
Spst3g03986 628 MobiDBLite consensus disorder prediction 212 242 - -
Spst3g03986 628 MobiDBLite consensus disorder prediction 49 89 - -
Spst3g03986 628 MobiDBLite consensus disorder prediction 1 21 - -
Spst3g03986 628 Pfam Protein kinase domain 301 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03986 628 MobiDBLite consensus disorder prediction 259 288 - -
Spst3g03986 628 ProSitePatterns Protein kinases ATP-binding region signature. 306 329 IPR017441 GO:0005524
Spst3g03986 628 FunFam Mitogen-activated protein kinase kinase kinase 5 297 595 - -
Spst3g03986 628 MobiDBLite consensus disorder prediction 102 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03986 Spst-Chr3 90380174 90384383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03986 115 596 MAP Kinase Kinase Kinase AT5G66850 59.259 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst3g03986 Pkinase 5.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03986 - - gmx:100790701 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03986 3 90380174 90384383 Spst3g03986 3 90380174 90384383 PCT