Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03980 ATGGAGCGGAAGATGGATCGGGCGGCGTTGACTATCGGACCGGGCATGGACATGCCGATCATGCACGACAGCGACCGGTACGATCTGGTCCGTGACATTGGGTCCGGAAATTTCGGCGTGGCGAGGCTGATGCAGGATAAACAGACCAAGGAACTCGTTGCTGTCAAGTACATCGAGAGGGGCGATAAGATTGATGAAAATGTAAAGAGGGAGATCATTAATCACAGGTCTTTGAGACATCCCAACATTGTTAGATTTAAAGAGGTTATTTTAACACCTACTCATCTGGCGATTGTTATGGAATATGCATCTGGAGGAGAGCTCTTTGAGAGAATATGCAATGCTGGGCGTTTTACTGAGGATGAGGCTCGATTCTTTTTTCAACAACTCATCTCTGGGGTTAGTTATTGCCATGCTATGCAAGTATGTCATCGGGACTTAAAGCTGGAAAACACTTTGCTAGATGGCAGTCCGGCACCTCGTTTGAAGATATGTGATTTTGGGTACTCCAAGTCTTCAGTGCTTCATTCACAACCAAAGTCAACTGTCGGGACTCCTGCGTATATTGCTCCAGAAGTTTTGCTGAAACAAGAGTATGATGGCAAGCTTGCAGATGTCTGGTCATGTGGAGTCACCTTATATGTGATGTTAGTGGGAGCATATCCTTTTGAAGATCCTAATGAACCAAAGGACTTTCGGAAGACTATTCAGAGAATTCTTAGTGTCCAGTATGCCATTCCAGACTGTGTTCAAATATCTCAAGAGTGTCGCCACCTTATCTCAAGGATTTTTGTTTTTGACCCAGCAGAGAGAATCACCATGTCTGAAATCTGGAACCATGAATGGTTTCTGAAGAATCTCCCTGCAGACCTGATGGATGAGAAGATAATGAGTAATCAATTTGAAGAGCCAGACCAACCCATGCAGAGCATCGATACGATCATGCAGATAATTTCAGAAGCTACCGTACCAGCAGCCGGGACCTATACTTTTGACCAGTTAATGGGGGAGCAAATTTATGACTTGGAATCTGAATCTGATGCTGAATCTGAGCTTGATATAGATAGCAGTGGGGAGATAGTGTATGCCATATAG 1095 0.4457 MERKMDRAALTIGPGMDMPIMHDSDRYDLVRDIGSGNFGVARLMQDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFTEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKLADVWSCGVTLYVMLVGAYPFEDPNEPKDFRKTIQRILSVQYAIPDCVQISQECRHLISRIFVFDPAERITMSEIWNHEWFLKNLPADLMDEKIMSNQFEEPDQPMQSIDTIMQIISEATVPAAGTYTFDQLMGEQIYDLESESDAESELDIDSSGEIVYAI 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03980 364 Gene3D Transferase(Phosphotransferase) domain 1 103 290 - -
Spst3g03980 364 FunFam Serine/threonine-protein kinase SRK2E 103 291 - -
Spst3g03980 364 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Spst3g03980 364 ProSiteProfiles Protein kinase domain profile. 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03980 364 SMART serkin_6 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03980 364 PANTHER SERINE/THREONINE KINASE 26 309 - -
Spst3g03980 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Spst3g03980 364 Gene3D Phosphorylase Kinase; domain 1 5 102 - -
Spst3g03980 364 SUPERFAMILY Protein kinase-like (PK-like) 19 322 IPR011009 -
Spst3g03980 364 FunFam Serine/threonine-protein kinase SRK2E 18 102 - -
Spst3g03980 364 Pfam Protein kinase domain 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03980 364 CDD STKc_SnRK2 26 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03980 Spst-Chr3 90329781 90333984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03980 26 293 CBL-interacting serine-threonine protein kinases AT4G24400 42.960 2.51e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Spst3g03980 Pkinase 1.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03980 K14498 - gmx:100806949 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03980 3 90329781 90333984 Spst3g03980 3 90329781 90333984 PCT