Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03978 ATGGAAGAGATGGCATTACCAATGAATCGTCCCTTTGGTGTTCCTGAAAAGCCAGGATTCACTGTTGGGTTGGATGTACCATTTACCAAGTTGAAGATGGAACTTCTCAGCGAACCTGCGTCCATCATTCTGTTGACTGGTTTTGGAGGATCTGGGAAAACCACTCTGGCTACGAAACTTTGTTGGGATACACAAATCATGGGTAAATTCAAGGAAAATATATTATTTTTCACCTTCTCTAGGGCTCCTAAATTGAAGATTATTGTAGAAAGACTATTTGAGCATTGTGGAGACCAAGTGCCTGAGTTTCAAAGCGACGAAGATGCCGTTACTCAATTGGGACTTTTGCTGAGGAAAACTGATGCAACTCCTGTATTACTGGTCCTGGATGATGTCTGGCCTGGCTCAGAAGCCATAGTTGAGAAATTTAAAGTTCAGATATCAAGTTATAAAATTTTGGTGACTTCAAGAGTTTCATTTCCTAGATTTGGCACTCCACTCATCTTAAAACCTCTTGTTCATGAAGATGCGATAACCCTTTTCCATCACCATGCTCTCTTCAAGAAAAGCAGTTCATATATTCTTGACGAAGATCTGGTCCAAAAGGTGGTGACACATTGCAAGGGTTTACCGCTTGCCATTAAAGTTATTGGTAGATCACTAAGTAATCGACCTTATGAATTGCTGCAAAGGATGGTGGAGGAATTGTCCCAAGGTCATTCTATACTTGATTCCAACACTGAATTACTTACTTCCCTCCAAAAGATCTTAGATATCTTGGGAGATAATTCCATAATCAAAGAATGCTTCATGGACTTGGCTTTATTTCCTGAAGACCACAGAATTCCTGTTGCCGTTCTCGTTGATATCTGGGTAGAGTTGTATGGACTAGATAATAGTGGCATAGAAGTAATGGCCATTGTCAACAAATTAGACTCCATGAATTTGGCTAATATCTTCGTAACAAGGAAAAATACAAGTGACATAGACAATTACTACTACAATAACCATTTTGTAATCCTTCATGATATTCTAAGAGACTTGGCAATTTATCAAAGCACTCAAGAACAAACTGAACAGAGAAAAAGACTCATGATTGACATGAACGAAAATAAACCTGAATGGTGGCGTAGGGAGAAACAGCAAGGCATTATGATTTGTGCTCGCACATTGTCTATATCAACCGATGAAACTTTCACTTCATATTGGTCCCACCTATTACCAGCTCAAACTGAGGCTCTGATTTTAAACCTTCGAGCTAATCAGTACTCCTTTTCAGAGTTCCTGAAAGAAATGAGTAAACTAAAGGTTCTGATTGTCGTAAAGTATGGTTCCCATCCTTGTGAAATCATCAATTTTGAGCTACTTGGCTCACTAAACAACCTAAAACGAATCAGACTAGAGAGGATTTTTATTCCTTCCTATTACATATTAAAGAATCTTAAAAAGTTATCCCTCTACTTGTGCAATACAAGACAGGCTTTTGAAAACCATAACATGCTAATTTCTGATGCTTTTCCAAATCTAGAAGATTTGAGTATTGACTATTGCAAACATATAGTGGGATTACCCAAGGGTCTATGTGATATCACCTCCTTGAAGATGCTCAGTATTACTAATTGCCATAAGCTTTCTGCATTGCCCCAAGAAATTGGAAACTTGGTGAATTTGACGCTTCTGAGGCTAAGTTCTTGTACTGATTTGGAAGGGATACCGAATTCTATTGTAAAACTTTCAAATCTAAGACACATGGACATCTCAAACTGCATTAGCCTTCATAATTTACCAGAGGACTTCGGCAATCTATGTAATCTTAGAAATCTGTACATGACAAGTTGTGCAAGGTGTGAATTGCCACCCTCAATCGTCAATCTTAAGAATTTAAAGGAAGTGGTATGTGATGAAGAGACGGCTGCTTCATGGGAACCTTTCAAACATATGCTTCCCTATCTAAAGATATATACTCCTGAACTTGATGTTAACTTGAATTGGCTTCATGCAATGCACTTTTAA 2013 0.382 MEEMALPMNRPFGVPEKPGFTVGLDVPFTKLKMELLSEPASIILLTGFGGSGKTTLATKLCWDTQIMGKFKENILFFTFSRAPKLKIIVERLFEHCGDQVPEFQSDEDAVTQLGLLLRKTDATPVLLVLDDVWPGSEAIVEKFKVQISSYKILVTSRVSFPRFGTPLILKPLVHEDAITLFHHHALFKKSSSYILDEDLVQKVVTHCKGLPLAIKVIGRSLSNRPYELLQRMVEELSQGHSILDSNTELLTSLQKILDILGDNSIIKECFMDLALFPEDHRIPVAVLVDIWVELYGLDNSGIEVMAIVNKLDSMNLANIFVTRKNTSDIDNYYYNNHFVILHDILRDLAIYQSTQEQTEQRKRLMIDMNENKPEWWRREKQQGIMICARTLSISTDETFTSYWSHLLPAQTEALILNLRANQYSFSEFLKEMSKLKVLIVVKYGSHPCEIINFELLGSLNNLKRIRLERIFIPSYYILKNLKKLSLYLCNTRQAFENHNMLISDAFPNLEDLSIDYCKHIVGLPKGLCDITSLKMLSITNCHKLSALPQEIGNLVNLTLLRLSSCTDLEGIPNSIVKLSNLRHMDISNCISLHNLPEDFGNLCNLRNLYMTSCARCELPPSIVNLKNLKEVVCDEETAASWEPFKHMLPYLKIYTPELDVNLNWLHAMHF 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03978 670 Gene3D - 5 160 IPR027417 -
Spst3g03978 670 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 12 665 IPR039203 GO:0050832
Spst3g03978 670 Pfam NB-ARC domain 30 255 IPR002182 GO:0043531
Spst3g03978 670 Gene3D Ribonuclease Inhibitor 375 657 IPR032675 -
Spst3g03978 670 Gene3D - 254 351 IPR036388 -
Spst3g03978 670 PRINTS Disease resistance protein signature 119 133 - -
Spst3g03978 670 PRINTS Disease resistance protein signature 207 221 - -
Spst3g03978 670 PRINTS Disease resistance protein signature 576 592 - -
Spst3g03978 670 PRINTS Disease resistance protein signature 42 57 - -
Spst3g03978 670 SUPERFAMILY L domain-like 341 635 - -
Spst3g03978 670 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 273 IPR027417 -
Spst3g03978 670 Gene3D - 172 253 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03978 Spst-Chr3 90306913 90309827 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03978 47 629 WRKY Transcription Factor Family AT5G45050 23.065 1.16e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03978 - - gmx:100793054 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03978 3 90306913 90309827 Spst3g03978 3 90306913 90309827 ECH
Spst3g03975 3 90266304 90270123 Spst3g03978 3 90306913 90309827 PCT