Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03977 ATGGAAGAGACTGCACAACAAATCAAGCGTCCTTTTGGAATTCCTGAAAAGCCAGAATTCACTGTTGGGTTGGATGTAGCATTGAGCAAGTTGAAAATGGATGTTCTCAGGGAAGGTGTGTCCATAATCGTGTTGACTGGTTTGGGAGGATCGGGGAAAACCACTCTGGCGACAATGCTCTGTTGGGATGAACAAGTCATGGGTAAATTCAAGGAAAATATTTTATTTGTCACCTTCTCTAAAGCGCCTAAGTTGAAGATTGTTGTAGAAAGACTATTTGAACACTTTAGATTTCAAGTGCCGGAGTTTCAAAGCGATGGAGATGCAGTTAATCAATTGGGACTTTTGCTGAGGAAAATTGATGCAAATCCAATGTTGTTGGTCCTGGATGATGTTTGGCCCGGCTCAGAAGCCGTTGTTGAGAAACTTAAATTTCAGATATCAGATTATAAAATTTTGGTGATTTCAAGGGTTGCATTTCCTAGATTTGGCACTTCACTCGTCTTAAAACCTCTTGATCATGAAGATGCAATAACCCTTTTCCGACATCATGCTTTCTTGGAAAAAAGAAGTTCAAATATTCCTGACGAGGATCTTATCCAAAAGGTGGTGAGACATTGCAAGGGTTTACCGCTTGCCATTAAAGTGATTGGTAGATCACTCAGTCATCGGTCTATTGAGTTGTGGCAAAAGACAGTGAAGGAGTTGTCACAAGGTCATTCTATACTTGATTCTAACTCTGAATTACTTACTTCCCTCCAAAAGATCTTGGATCTATTGGAAGATAATCCCATCATAGAGTGCTTCATGGACTTAGCGTTATTTCCTGAAAACCAAAGAATTCCTGTTGCTGCTCTCATTGATATGTGGGTTGAGCTGTATGGACTAGATAATTATGGCATAAAAGCAATTGCCACTGTCAACAGATTGGATTCCATGAATTTGGCTAATGTCTTAGTAACAAGGAAAAACACAAGTGACACGGACAGTTATTACTACAATAACCATTTCATCATCCTTCATGATATTCTCAGAGACTTGGCAATTTACCAAAGCAACCATGCCCAAATTGAACTGAGAAGAAGACTGATGATTGACATCAATGAAAATAAACCTGAAGGGTCTCTTGGAGAGAAGCAGCAAGGCATGATGAACCGCATATTGCCAAATAATTTTAGATGGTGTGATGAACGGGAAACCCAACAGATTCCTGCACGGACATTGTCTATATCAACTGATGAAACTTACACTTCATATTGGCCGCAACTACAACCAGCTCAAGCTGAGGTTCTGATTTTAAACCTTCGAACTAATCAGTACTCCTTTCCAAAGTTCCTGAAAGAAATGAGTAAACTAAAAGTTCTGATAGTCATGAATAATGGTTTCCATCCTAGTGAATTGATAAATTTTGACCTACTTGGCTCTTTATCACACCTAAAAAGAATGAGACTAGAGAGGATTTCTATTCCTTCCTTTGTCACATTGAGAAATCTTAAAAAGTTATCCCTCTACTTGTGTGATACAAGACAGGCTTTTGGAAACTGTGACATGCTAATTTCAGATGCTTTTCCAAATCTAGAGGAATTGAATATTGATTATTGCAAAGATATGGTTGGATTGCCTAAGGGGCTGTGTGATATCACCTCCTTGAAGATGCTCAGTATTAGTAATTGCCATAAGCTTTCTGCATTGCCCCATGAAATTGGAAACTTGGTGAATTTGAAACTTCTGAGGCTAAGCTCCTGTACTGATTTGGAACGGATACCAAATTCTGTTGGAATTCTTTCAAATCTAAGACACATGGACATCTCAAACTGCATAAGCCTTCCTAATTTACCTGAGGAATTTGGTAATCTATGTAATCTAAGAACTCTCTACATGACAAGTTGTACAAGGTGTGAATTGCCATCCTCAACCATCAACCTTAAGAATTTAAAGGAGGTGGTATGCGATGAAGAGACGGCTGTTTCATGGGAAGCTTTCAAACCATTGCTTCCGAATCTGAAGATAAATGTTCCTCAACTTGATGTCAACTTGAATTGGCTTCATGCAATTCACTCCTAA 2064 0.3886 MEETAQQIKRPFGIPEKPEFTVGLDVALSKLKMDVLREGVSIIVLTGLGGSGKTTLATMLCWDEQVMGKFKENILFVTFSKAPKLKIVVERLFEHFRFQVPEFQSDGDAVNQLGLLLRKIDANPMLLVLDDVWPGSEAVVEKLKFQISDYKILVISRVAFPRFGTSLVLKPLDHEDAITLFRHHAFLEKRSSNIPDEDLIQKVVRHCKGLPLAIKVIGRSLSHRSIELWQKTVKELSQGHSILDSNSELLTSLQKILDLLEDNPIIECFMDLALFPENQRIPVAALIDMWVELYGLDNYGIKAIATVNRLDSMNLANVLVTRKNTSDTDSYYYNNHFIILHDILRDLAIYQSNHAQIELRRRLMIDINENKPEGSLGEKQQGMMNRILPNNFRWCDERETQQIPARTLSISTDETYTSYWPQLQPAQAEVLILNLRTNQYSFPKFLKEMSKLKVLIVMNNGFHPSELINFDLLGSLSHLKRMRLERISIPSFVTLRNLKKLSLYLCDTRQAFGNCDMLISDAFPNLEELNIDYCKDMVGLPKGLCDITSLKMLSISNCHKLSALPHEIGNLVNLKLLRLSSCTDLERIPNSVGILSNLRHMDISNCISLPNLPEEFGNLCNLRTLYMTSCTRCELPSSTINLKNLKEVVCDEETAVSWEAFKPLLPNLKINVPQLDVNLNWLHAIHS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03977 687 PRINTS Disease resistance protein signature 119 133 - -
Spst3g03977 687 PRINTS Disease resistance protein signature 42 57 - -
Spst3g03977 687 PRINTS Disease resistance protein signature 207 221 - -
Spst3g03977 687 PRINTS Disease resistance protein signature 569 585 - -
Spst3g03977 687 Gene3D - 254 349 IPR036388 -
Spst3g03977 687 SUPERFAMILY RNI-like 432 680 - -
Spst3g03977 687 Gene3D - 171 253 IPR042197 -
Spst3g03977 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 263 IPR027417 -
Spst3g03977 687 Pfam NB-ARC domain 38 259 IPR002182 GO:0043531
Spst3g03977 687 Gene3D - 1 160 IPR027417 -
Spst3g03977 687 Gene3D Ribonuclease Inhibitor 390 664 IPR032675 -
Spst3g03977 687 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 16 682 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03977 Spst-Chr3 90294104 90297139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03977 475 649 WRKY Transcription Factor Family AT4G12020 28.141 8.36e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03977 - - gmx:100793054 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03977 3 90294104 90297139 Spst3g03977 3 90294104 90297139 ECH