Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03975 ATGGAACAGACCACGCAGCGCGTTGTACTTCCAACCCAATTTCAAGAGGGATTGAGGATGATAACGGAAGTAGTGGAAAAAGGTAAGAGTAGTGAAAGCAACAAGCAGATACTGAGGTCAACTCTCAAGGATATGAACCCTGTGGTGCAAGAGATCGAGCAATTAAATGAACACTTAAATCCACCAAGAGAAGAAATCAAAACCCTTATTGACCAAAAAGATGCAAAAGAAGAGCCTGTGTGCAAATGCTTCTCCAAGAATTTTTGTTTGGACAAGTGTCTCGCTTGGTTTCTTTGCAGATTTGGACACAAGAGGGACGATTCATTTGCTGGTGGTGGCAAGCAAACTCTTGTGGCAAAAGATATTGAAGAGAAACTGTACAAAGTAAGGGAAATTCTTGAGCTTCTCAGCAAAGAGAATCGTGAGCAGAAGTATTGTGGTATTAGAGGGCCTATCAAGCTTCCTTTTGGTGTTCCTGCAAACCCAGATTTCACGGTTGGCTTGGATATTCCGTTGAAAGAGTTGAAGATGGAGGTTCTCAAAGATTGTGTGTCTGTTATTGGGCTGACTGGTTTGGGTGGAATGGGGAAAACCACTCTGGCTACAAAGCTCTGTTGGGATGAACAAGTCAAGGGTAAATTTGGGGAAAACATTTTATTTGTCACGGTCTCAAAAACGCCCAAGTTGAAGATTATTGTAGAGAGATTATTTGAACACTGTGGAATTGAAGTACCCGATTTTCTAAGTGATGAAGATGCAGTTAATCAATTGGGACTTTTGCTTAGACAAATAGGTAGAAGTTCAGTGTTGCTGGTCCTGGATGATGTTTGGCCTGGATCAGAAGCCCTCGTCGAGAAATTTAAAGTCCAGATACCAGACTATAAAATTTTGGTGACTTCTAGGGTTGCATTTCCTAGATGTGACACCCAGTGTTTCTTAAAACCTCTTGGTCATGATGATGCAGAAACCCTTTTCCGACATTATATGAGTGGTTCAAGTATTCCTGATGAAGTCATCCAAAAGGTTGTGAGAAACTGCAAGGGTTTACCGCTTGCTATCAAAGTAATTGGGAGATCACTCTCTAATCAGCGTTCTGAGGTGTCGCTAAAGATGGTGGAGGAATTGTCGCAAGGTCGTTTTATACTTGATTCTAATATTGAACTGCTTACATGCCTCCAAAAGATCTTGGATGTTTTGGAAGATAATCTTGTTATCAAAGGGTGCTTCATGGATCTAGGGTTATTTCCCGAAGACCAAAGAATTCCTGTTACTGCTCTCATTGATATGTGGTCTGAGTTGTATAGACTAGATGATGACGGCAAAGAGGCAATGGCCGTCATCAACAAATTAAACTCCATGAATCTAGCCAATGTCGTGGTAGCAAGGAAAAATGCCAGTAACACAGACAATTACAACTACAATAACCACTTCATCGTTCTTCATGACCTCCTGAGAGAGCTTGCAATTTATCAGTGTTCTCAGGAACCAATGGAACAGAGAAAAAGATTGATTATTGAGATAAATCAAAATCAACATGGGGAAGAGACAACATTTCTTAGCTGGTATGTTAAACAGAAGCCCCAGCATGTCACTGCCCACACATTGTCCATATCGACTGATGAAAATTGCACTTCAGATTGGCCCCAAATGCCACTAGCTCAAGTTGAGGTTTTGATTTGGAATCTTCGGACTAAGCAGTATTCCTTTCCAGCTTTCATGGAAGATATGAACAAACTAAAAGTTCTGATAGTGACAAATTACAGTTTCTATCCTTCTGAAATCAACAACTTTGAGCTACTTGGCTCTTTATCCAACCTGAAAAGAATCAGATTAGAGCGAATTTCTGTTCCTTCTTTTGTTGCAATGAAGAATCTTAAAAAGTTATCCCTCTACTTGTGTAATATGAAACAGGCATTTGAGAACAATGACATGTTAATTTCATACGCTTTTCCAAATCTTGAAGATTTGAATATTGACTATTGCAAGGATATGTTGGGATTGCCTAAGGGGCTCTGTGATATCATCCCCCTGAAGAAGCTCAGTATTACTAATTGCCACAAACTCTCTGCACTGCCGCAAGATATTGGAAAATTGGGGAATTTGGAACTTCTAAGGCTCAGTTCTTGTACTGATTTGGAAGGGATACCAGATTCTATTGGAAGGCTCTCAAATCTACGACTTCTTGACATCTCACATTGTATAAGCCTTCCTAATTTACCGGAGGATTTTGGTAATCTGTCTAATCTACAGAATCTCTACATGACAAGTTGTGAAAGGTGTGAATTACCATTCTCTGTAACTAATCTTGGGAATTTAAAGGTTGTGATATGCGATGAAGAGACAGCTGCTTCATGGGAGAATTTCAAGCCTATGCTTCCCAATCTAAAGATAGACATTCCTCAAGTTGATGTTAACTTGAGTTGGCTTCATACAACTTCCTCCTGA 2445 0.4004 MEQTTQRVVLPTQFQEGLRMITEVVEKGKSSESNKQILRSTLKDMNPVVQEIEQLNEHLNPPREEIKTLIDQKDAKEEPVCKCFSKNFCLDKCLAWFLCRFGHKRDDSFAGGGKQTLVAKDIEEKLYKVREILELLSKENREQKYCGIRGPIKLPFGVPANPDFTVGLDIPLKELKMEVLKDCVSVIGLTGLGGMGKTTLATKLCWDEQVKGKFGENILFVTVSKTPKLKIIVERLFEHCGIEVPDFLSDEDAVNQLGLLLRQIGRSSVLLVLDDVWPGSEALVEKFKVQIPDYKILVTSRVAFPRCDTQCFLKPLGHDDAETLFRHYMSGSSIPDEVIQKVVRNCKGLPLAIKVIGRSLSNQRSEVSLKMVEELSQGRFILDSNIELLTCLQKILDVLEDNLVIKGCFMDLGLFPEDQRIPVTALIDMWSELYRLDDDGKEAMAVINKLNSMNLANVVVARKNASNTDNYNYNNHFIVLHDLLRELAIYQCSQEPMEQRKRLIIEINQNQHGEETTFLSWYVKQKPQHVTAHTLSISTDENCTSDWPQMPLAQVEVLIWNLRTKQYSFPAFMEDMNKLKVLIVTNYSFYPSEINNFELLGSLSNLKRIRLERISVPSFVAMKNLKKLSLYLCNMKQAFENNDMLISYAFPNLEDLNIDYCKDMLGLPKGLCDIIPLKKLSITNCHKLSALPQDIGKLGNLELLRLSSCTDLEGIPDSIGRLSNLRLLDISHCISLPNLPEDFGNLSNLQNLYMTSCERCELPFSVTNLGNLKVVICDEETAASWENFKPMLPNLKIDIPQVDVNLSWLHTTSS 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03975 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 412 IPR027417 -
Spst3g03975 814 Gene3D - 152 307 IPR027417 -
Spst3g03975 814 Coils Coil 119 139 - -
Spst3g03975 814 Gene3D Ribonuclease Inhibitor 495 794 IPR032675 -
Spst3g03975 814 Gene3D - 391 490 IPR036388 -
Spst3g03975 814 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 5 809 IPR039203 GO:0050832
Spst3g03975 814 Gene3D - 316 387 IPR042197 -
Spst3g03975 814 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 10 83 IPR008808 -
Spst3g03975 814 SUPERFAMILY RNI-like 565 777 - -
Spst3g03975 814 PRINTS Disease resistance protein signature 263 277 - -
Spst3g03975 814 PRINTS Disease resistance protein signature 186 201 - -
Spst3g03975 814 PRINTS Disease resistance protein signature 720 736 - -
Spst3g03975 814 PRINTS Disease resistance protein signature 346 360 - -
Spst3g03975 814 Pfam NB-ARC domain 184 375 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03975 Spst-Chr3 90266304 90270123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03975 184 766 WRKY Transcription Factor Family AT5G45050 23.443 5.50e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03975 - - gmx:100816134 1226.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03975 3 90266304 90270123 Spst3g03975 3 90266304 90270123 ECH
Spst3g03975 3 90266304 90270123 Spst3g03978 3 90306913 90309827 PCT