Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03974 ATGGCTATGGTTCTTGATGCTGTTCTGGGAAAAGTGCTTGATGATCTGCTGAATGAAATTGTGAAAATGAAAGACAGAGCTGTGGAGTTCAGATCCACCCTGGAAAAATTGCAGTCCACCATCGAAACAGTAGACCCATTGGCTAGGCAGATAGATGGTCTTAACAAGCGATTGGATAAACCGCCTAAGGAAACGAAGAAGCTGATCGATCAGTTGGCGAAGGGGAAGGAGCTTGTTAAGGAGTGCTCCAAAGTGGCTTGGTGGAATTTCTGTTATAAGGCCAATTCCCAAGAGAAACTTCAAGCCTTGATCGATTCTATTTCTGAGTACTTTCGTTTGGATATGCAAGGAAATATAAACGTCAATGTGTTGGTGAACCAGGTAATGCTGTCCGAGATTCATGCGACGATTACGAGGAATGTTCCGAGAAGGAGTGAATTAAAAGGCTTGTGCTCGCCCCCTGAACCCCCTGCTTTCACTGTTGGGTTGGATGTTCATTTGAGGGAGTTGAAGTTCAAGTTGCTCAAGAACCATCATGTGGGGTCAGTTCTCACGGTCACCGGAACAGGTGGTTCGGGGAAGTCAGCTTTGGCCAAAATGTTTTGTTCTGATGAGGAAGTCAAAGGTGAATTCAAGGACAACATATTCTTCATCTCCTTTGCGGGAGCGCCCAAGCTGAGTACCATAGTGCAGAGACTGTTTGAACACAATGGTTACAATAAGCCTGAGTTTCAAAGTGATGAGGATACAGTTTATCAATTGGAAAATTTGCTAAAAAGGATTGGGGAAAACCCCATGCTGTTGGTCCTGGAAGCTGATGTTTCGCCAGAGTCAGCATCCCTAGTTGAGAAATTCGTGTTTCAGATCCCAAACTACAAGATTTTAGTGACATCAAGATTCACAATTAAAGGATTTGGGCCGCCATACGTGTTGAAATCACTTAATGAAACCGATGCTTTGAACTTATTTCGCCACTCTGCATCCCTGGATCATACTAGCTCTAAAATTCCTGATCATATTGTCAAGAAGATAGCAAAAGGGTGCAGTGGTTCTCCCTTGGCTCTTACAGTGACTGGCAAATCACTAAGTTTTGAACCACTGGAGGTTTGGCAAAACAGGGCGAAGACATTGTCGAACGGTCATTCTATTCTTACTGCTAGTTCTAGGAACGATGTGCTTTTTACTTGCCTCCAAAAAATCTTTGATGACTTGGATCCTAAGGTGGCCGAGTGTTTTACGGACCTGAGCTTATTTCCTGAAGCACAGAGGATACCCGCTGCTGCACTTGTTGATATATGGGGAGAACAGCATGACGAAGATGATGACACTGCAATGGAGAATATTAATGAACTCGTCAAAAGGAATGTGGTTGATGTTGTTGTCACAAGGAATACAGCAAGTGGCACAGTTGACTACAATTACCACTATGTTACGCAGCATGGTCTTCTTCGGGACCTAGCTATCCTTCAAACAAGAAATTTGCCGACGGAGAAGAGGCATAGACTAATTATTGACCTAAGAGGTAACAACATTCCCAAATGGTGGACTACACAGAATGAGTATCACATTGCAGCCCACACATTATCCATATCAACTGAGAGTTCTCAATCACTAATTCTGGAATCTGCTTTTGCAGATGAAGCATTCACTTCAGCGTGGTGCAACTTGCAGCCAAATGAGGTTGAGGTTCTAGTGATGAACCTTAGAGAAAAAAAGCACTCACTACCAATGTTCATGAAAAAAATGAATAAATTAAAAGTTCTGATCATAACGAATTATGACGTCGGTCGTGCTGAGTTGAAGAATTTCGAGCTGCTTGATTATCTTTCTGATCTCAGACGAATCAGGTTAGAGAAGGTTTCAATTCCTTTCCTGAGCAAGACTGGAGTGCCATTGAAGAATCTGCACAAGTGCTCTTTCTTTATGTGCAATGTGAATGAAGCCTTCGAAGATAGCACCATCCAAGTTTCTGATGTGCTGCCAAATTTGGAGGAGATGAACATTGATTACTGTGATATGGTGGAATTGCCAGATGGACTCTCTGATATTATTTCCCTAAAGAAGCTAAGCATCACAAACTGCCATAAACTTTCTAAACTTCCTGAAGGAATTGGAAAGTTGGTCAATTTAGAATCACTGAGGCTTGCTTCTTGTACTAATTTAGAAGAGTTGCCTGACTCAATCACAAGACTTGATAAGCTGAACTTTCTTGACATCTCTGACTGCGTAAGCCTTCGAAAGTTACCAGAAAACATGGGGGAGTTGGGTAGCTTAGAAAGAATCAATTGCAGAGGTTGCACGAGATTATCTGAATTGCCATACTCAGTTACGGACCTTGAGGGCTTAAGGGTGGTGGTATGTGATGACGAGTTGCAAGCATTATGGGAACCTATCAGACACATATTTAGTGATCTAACGCTAGATGTGGTCCAAGTTGCTAACATCGTTAAATTGGCTTCGGTTGAGTGA 2469 0.4253 MAMVLDAVLGKVLDDLLNEIVKMKDRAVEFRSTLEKLQSTIETVDPLARQIDGLNKRLDKPPKETKKLIDQLAKGKELVKECSKVAWWNFCYKANSQEKLQALIDSISEYFRLDMQGNINVNVLVNQVMLSEIHATITRNVPRRSELKGLCSPPEPPAFTVGLDVHLRELKFKLLKNHHVGSVLTVTGTGGSGKSALAKMFCSDEEVKGEFKDNIFFISFAGAPKLSTIVQRLFEHNGYNKPEFQSDEDTVYQLENLLKRIGENPMLLVLEADVSPESASLVEKFVFQIPNYKILVTSRFTIKGFGPPYVLKSLNETDALNLFRHSASLDHTSSKIPDHIVKKIAKGCSGSPLALTVTGKSLSFEPLEVWQNRAKTLSNGHSILTASSRNDVLFTCLQKIFDDLDPKVAECFTDLSLFPEAQRIPAAALVDIWGEQHDEDDDTAMENINELVKRNVVDVVVTRNTASGTVDYNYHYVTQHGLLRDLAILQTRNLPTEKRHRLIIDLRGNNIPKWWTTQNEYHIAAHTLSISTESSQSLILESAFADEAFTSAWCNLQPNEVEVLVMNLREKKHSLPMFMKKMNKLKVLIITNYDVGRAELKNFELLDYLSDLRRIRLEKVSIPFLSKTGVPLKNLHKCSFFMCNVNEAFEDSTIQVSDVLPNLEEMNIDYCDMVELPDGLSDIISLKKLSITNCHKLSKLPEGIGKLVNLESLRLASCTNLEELPDSITRLDKLNFLDISDCVSLRKLPENMGELGSLERINCRGCTRLSELPYSVTDLEGLRVVVCDDELQALWEPIRHIFSDLTLDVVQVANIVKLASVE 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03974 822 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 7 135 IPR008808 -
Spst3g03974 822 Gene3D - 148 303 IPR027417 -
Spst3g03974 822 SUPERFAMILY RNI-like 572 786 - -
Spst3g03974 822 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Spst3g03974 822 PRINTS Disease resistance protein signature 183 198 - -
Spst3g03974 822 PRINTS Disease resistance protein signature 729 745 - -
Spst3g03974 822 PRINTS Disease resistance protein signature 348 362 - -
Spst3g03974 822 Gene3D - 8 116 IPR036537 GO:0007166
Spst3g03974 822 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 810 IPR039203 GO:0050832
Spst3g03974 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 415 IPR027417 -
Spst3g03974 822 Gene3D Ribonuclease Inhibitor 515 803 IPR032675 -
Spst3g03974 822 Gene3D - 313 399 IPR042197 -
Spst3g03974 822 Coils Coil 13 40 - -
Spst3g03974 822 Gene3D - 400 488 IPR036388 -
Spst3g03974 822 Pfam NB-ARC domain 166 401 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03974 Spst-Chr3 90240698 90246601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03974 666 785 WRKY Transcription Factor Family AT4G12020 30.833 2.16e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03974 - - gmx:100812310 1148.27