Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03944 ATGGACAAGAGAAGTGTGCATGATGTTGTACTTGTTGGTGGTTCTTCTAGGATTCCAAAAGTGCAGCAACTACTGCAGGACTTCTTTGAGAGGAAGGATCTGTGCAAGAGCATCAACCTTGATGAGGCTGTTGCTTACGGTGCAGCTGTGACAGAAGAATTTGTTACAATTGCAGATAACCAACCCGTTGTCTTTATCCAGGTTTATGAAGGTGAAAGAACAAGAGCCACTGATAACAACTTACTAGGTTCTTTTACACTTTATGGACTTCCTCCAGCTCCTCGTGGTCATCCCTTTGATGAGTGCTTCGCCATAGACGAAAATGGTATCCTATCTGTTTCTGCTGAGGAAAAAACTTCTGGCAATAAAAACGAGATTACCATAACCAATGATCAAGGAAAACTGTTCCTTAGGAAGGCTAAAGCAATGAATTATTTGGATTATTACATTTACAAGATCAGGCATTTTTCAAAGAAAGGGGATGTCAGGTCAAAGATTGGCCGAGAAGAAAAGGAGGATGTGAATTCTGCAATGATAAGGGCCACAGATTTACTAGATGGCAGTAACCAACAAGATGATGTAGCAGTGTTTGAGGATTGCCTGAATGAGCTAGTAAACCTCTTTGAATGTGTCAAGGCGACGGATGATATTGATTAG 657 0.411 MDKRSVHDVVLVGGSSRIPKVQQLLQDFFERKDLCKSINLDEAVAYGAAVTEEFVTIADNQPVVFIQVYEGERTRATDNNLLGSFTLYGLPPAPRGHPFDECFAIDENGILSVSAEEKTSGNKNEITITNDQGKLFLRKAKAMNYLDYYIYKIRHFSKKGDVRSKIGREEKEDVNSAMIRATDLLDGSNQQDDVAVFEDCLNELVNLFECVKATDDID 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03944 218 ProSitePatterns Heat shock hsp70 proteins family signature 3. 9 23 IPR018181 -
Spst3g03944 218 PRINTS 70kDa heat shock protein signature 38 58 - -
Spst3g03944 218 PRINTS 70kDa heat shock protein signature 6 22 - -
Spst3g03944 218 Gene3D - 142 213 IPR029048 -
Spst3g03944 218 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 42 141 IPR029047 -
Spst3g03944 218 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 142 208 IPR029048 -
Spst3g03944 218 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 50 135 IPR029047 -
Spst3g03944 218 PANTHER HEAT SHOCK PROTEIN 70KDA 1 161 IPR013126 GO:0005524|GO:0140662
Spst3g03944 218 SUPERFAMILY Actin-like ATPase domain 3 50 IPR043129 -
Spst3g03944 218 Gene3D - 1 39 - -
Spst3g03944 218 Pfam Hsp70 protein 52 133 IPR013126 GO:0005524|GO:0140662
Spst3g03944 218 Pfam Hsp70 protein 2 50 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03944 Spst-Chr3 89809760 89810563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03944 1 207 Calmodulin-binding Proteins AT3G12580 44.964 2.80e-62 203