Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03914 ATGGCTGAAGATGTCAATAAGCTTTATCAACTGATGAAGGTTATGCTTCCAATGCAAACATCAGATGTTATTTCTGATTGTAAAGCAAAATTTCAGCGGGAGTTTATTGGTGCCTCTGTGGAGCCAATGATGATAATAACAGAACTTTTGGAAGGTTGTTCGCTTCAAAAATACCTGGAGAGCATCTATCCAAGTACTCTGAGTTTAGAGCAATCCATAAGTTTTGCTTTGGATATTTCTCAAGCTATGGAGTATTTGCATGCGAATGGAATCATTCACCGCGATCTAAAACCTGGTAATATGCTTCTTGCCAAAGACAAAATGCAAATTTTACTTACAAACTTTGAGACAGCCAGAGAGGAGATATCTGGTGGGATGACTTCTGAGGCTGGTACATATCGGTACATGGCTCCTGAGATATTCAGCAAGGATCCACTTTCAAAAGGTGAAAAGAAATGCTATGACCACAGGGCTGACGTCTATAGTTTTGCTATGGTTCTGTGGGCCATAGTTAAAAATCAAACTCCATTTAAAGGAAGGAGTGACTTGTTGGCAGCATATGCTACTGCAAAAAACATGAGGCCTAGTGTGGAGGGTTTTCCAGAAGTTCTACTTCCCTTATTGCAGTCTTGTTGGGAAGAAGACCCAAAGCTACGACCTGAATTCTCAGAGATCACCCAAATCCTTGAAAAGCTTCTCCACAACTACCACTCAACAGAGATATCACCTGAGGAAAAAGGGTTTCCAACTACAAATATGCAGGAACCTATCCCTAATTATGCCTTTTTTATTTTTGTGGCTCTGAGAGCAAGTGATTCTAAACTAATCTATATGGGGGCTGGGGAAGAGAGCACAACGAAACCTTCTAAATCATCTTCATCAGCTCAGCAGGAGACACCAACAGTGCCTGCATATCCTGATTGGTCAAGCTCCATGCAGGCCTATTATGCTCCTGGAGCCACTCCGCCTCCCTTTTTTGCCTCAACTGTTGCTTCCCCAACTCCCCATCCCTATTTATGGGGAAGCCAGCATCCTTTGATGCCACCATATGGGACTCCAGTCCCATATCCAGCTCTATATCCTCCTGGGAGTATCTATGCTCATCCAAGCATGGCAGTGACTCCAAGTGCTGTTCAGCAAAGTACAGAGATTGAAGGGAAGGGAGCTGATGGAAAGGAATCAAAAAAGTTGAAAGGAACTTCTGCAAATACAGGTTCCAAAGCAGAAGAGAGTGGAAAGGGAGGGTCAGGTTCAGGCAATGATGGCATGTCGCAAAGTGGTGAAAGTGGTTCAGAGGGTTCATCAAATGCTAGTGATGAGAATACTAACCAACAGGAATCAGCTACAAACAAGAAGGGAAGCTTTGAGCTGATGCTTGTTGATGGAGCCAATGCACAGAACAATTCCGCTGGTGCAATTGCTCAATCTGTTGTGCCTGGAAAGCCTGTTGTCTCAATGCCAGCAACTAATCTTAATATTGGAATGGACTTGTGGAATGCATCATCTGGTGGTGGCGAAGCTGCAAAAATGAGACATAATCAGTCTGGTACCCCAGGAGTTGTTGCCCTTGGTGAACAATGGATACAAGATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCGAACAGAGAGTCAGCTAGGAGGTCAAGATTACGCAAGCAGGCTGAGTGCGAAGATTTACAAAAGAGGGTGGAGACACTGGGAGGTGAGAATCGAACACTCAGAGAAGAGCTTCAGAGACTTTCTGAAGAATGCGAGAAGCTTACATCTGAAAACAATTCAATCAAGGAAGAGTTGGAACGGATGTGTGGGCCAGAAGCAGTTGCTAACCTTGGATGA 1842 0.4397 MAEDVNKLYQLMKVMLPMQTSDVISDCKAKFQREFIGASVEPMMIITELLEGCSLQKYLESIYPSTLSLEQSISFALDISQAMEYLHANGIIHRDLKPGNMLLAKDKMQILLTNFETAREEISGGMTSEAGTYRYMAPEIFSKDPLSKGEKKCYDHRADVYSFAMVLWAIVKNQTPFKGRSDLLAAYATAKNMRPSVEGFPEVLLPLLQSCWEEDPKLRPEFSEITQILEKLLHNYHSTEISPEEKGFPTTNMQEPIPNYAFFIFVALRASDSKLIYMGAGEESTTKPSKSSSSAQQETPTVPAYPDWSSSMQAYYAPGATPPPFFASTVASPTPHPYLWGSQHPLMPPYGTPVPYPALYPPGSIYAHPSMAVTPSAVQQSTEIEGKGADGKESKKLKGTSANTGSKAEESGKGGSGSGNDGMSQSGESGSEGSSNASDENTNQQESATNKKGSFELMLVDGANAQNNSAGAIAQSVVPGKPVVSMPATNLNIGMDLWNASSGGGEAAKMRHNQSGTPGVVALGEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEDLQKRVETLGGENRTLREELQRLSEECEKLTSENNSIKEELERMCGPEAVANLG 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03914 613 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 533 596 IPR004827 GO:0003700|GO:0006355
Spst3g03914 613 MobiDBLite consensus disorder prediction 282 304 - -
Spst3g03914 613 FunFam BZIP transcription factor 533 584 - -
Spst3g03914 613 Pfam G-box binding protein MFMR 278 371 IPR012900 -
Spst3g03914 613 Pfam bZIP transcription factor 531 593 IPR004827 GO:0003700|GO:0006355
Spst3g03914 613 PRINTS Tyrosine kinase catalytic domain signature 47 60 IPR001245 GO:0004672|GO:0006468
Spst3g03914 613 PRINTS Tyrosine kinase catalytic domain signature 158 180 IPR001245 GO:0004672|GO:0006468
Spst3g03914 613 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Spst3g03914 613 PRINTS Tyrosine kinase catalytic domain signature 85 103 IPR001245 GO:0004672|GO:0006468
Spst3g03914 613 SUPERFAMILY Leucine zipper domain 534 590 IPR046347 GO:0003700|GO:0006355
Spst3g03914 613 CDD bZIP_plant_GBF1 536 586 IPR045314 GO:0003700|GO:0006355
Spst3g03914 613 SUPERFAMILY Protein kinase-like (PK-like) 42 337 IPR011009 -
Spst3g03914 613 Pfam Protein tyrosine and serine/threonine kinase 34 229 IPR001245 GO:0004672|GO:0006468
Spst3g03914 613 ProSiteProfiles Protein kinase domain profile. 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03914 613 Gene3D Transferase(Phosphotransferase) domain 1 18 256 - -
Spst3g03914 613 SMART brlzneu 531 595 IPR004827 GO:0003700|GO:0006355
Spst3g03914 613 MobiDBLite consensus disorder prediction 377 449 - -
Spst3g03914 613 Coils Coil 544 599 - -
Spst3g03914 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 91 103 IPR008271 GO:0004672|GO:0006468
Spst3g03914 613 PANTHER G-BOX-BINDING FACTOR 3-RELATED 278 609 IPR044827 GO:0003700|GO:0006355|GO:0043565
Spst3g03914 613 MobiDBLite consensus disorder prediction 284 304 - -
Spst3g03914 613 Gene3D - 534 588 - -
Spst3g03914 613 SMART serkin_6 9 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03914 613 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 538 553 IPR004827 GO:0003700|GO:0006355
Spst3g03914 613 MobiDBLite consensus disorder prediction 533 556 - -
Spst3g03914 613 MobiDBLite consensus disorder prediction 398 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03914 Spst-Chr3 89232617 89246661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03914 278 612 bZIP Transcription Factor Family AT4G36730 53.644 2.79e-106 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Spst3g03914 PK_Tyr_Ser-Thr 1.2e-32 CL0016
TF bZIP Spst3g03914 PK_Tyr_Ser-Thr 1.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03914 K09060 - gmx:778191 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03914 3 89232617 89246661 Spst3g03914 3 89232617 89246661 ECH