Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03912 ATGAGAGTTCCCTCATCACAGCCCAACAACCATTCTCCCACCCCAAACCTCCTCCTCCACGCCCTCCCCAACGCCACCAACACCACCTTCACCTACGAACCCACCTCCGTCCTCGACCTCTGCCGCAGCCCCAGCCCCGAAAAGAAACCAACTGTCCCTAAGCCAGACCCACAACACAACAACATCATCGCCACCATCACCACCACCACCACCACCACCAATTCCAACAACAACCTAGACCTGGACGATCATGTCTTGCCTAATTCCGATTGGTGGGAGTCCATCATGAAGGACCTAGCCTTACCCGAAGACTTTCCCACACCCCTTTCCAAGCCTAACATCAACCCATGCATCCCTGACTTTCCACCTTCTCACGACCCTCCCTTCGATCAACCTCCAGACTTTACCTCGCTTTCAGAAATTTACAACCAGAACCTCCCCTACAACTACACCACCACCAACGCTTTGGACCATTCCTTTCACGACCTCAACCACCACCACCACAACACCACCAACAACGTTAACAACAATTGGGACTTCATCGAGGAGCTTATCCGCGCCGCCGATTGCTTCGACAGCAGCCACTTCCAACTCGCTCAAGCCATACTCGAACGCCTCAACAACCGCCTTATTCGCTCACCCATGGCCAAGCCTCTCCACCGAGCCGCGTTTCACTTCAAAGACGCTCTCCAATCCATTCTCTCCCGTTCCAACCGTGCTGGTTCCAACCGGCTCTCCTCCATGGCCGAGATTGTTCAAACCATCAAAACGTTCAAGGCCTTTTCAGGAATTTCACCCATCCCAATGTTCTCTATCTTCACCACCAACCAGGCCTTGCTCGAAACCCTAAACGGATCCTCTTTCGTCCATGTCATCGATTTCGAAATCGGGCTCGGAATCCAATACGCCTCCCTAATGAAGGAGATAGCCGAGAAGGCTGCCGGCGCCTCACCTCTCCTCCGTATCACCGCCGTCGTGCCCGAGGAGTACGCAGTCGAGAGCCGCCTCGTCCGCGAGAATCTCAACCAATTCGCGCACGACCTCGGGATCCGCGCGCAGGTGGACTTCGTGCCACTTCGGACCTTCGAGACGGTTTCGTTCAAGGCCGTCAGGTTCGTCGACGGAGAGAAGATCGCGGTGCTTCTGTCGCCGACGATCTTCTGCCGCCTAGGCTCCGGCGGGGCCAGCGTCGGCGCGTTCCTGGCTGACGTGAGGAGGATGGCGCCCGGAGTGGTGGTGTTCGTGGACGGTGAGGGCTGGACGGAGGCTACGGTGGCTGCGTCTTTCCGGCGTGGTGTGGTGAACAGTTTGGAGTTTTACTCGATGATGCTGGAGTCGCTGGACGCGTCTGTGGCGGCCGGGGGAGGCGGCGAGTGGGTGAGGAGGATCGAGATGCTTCTGCTGCGGCCAAAGATCTTCGCGGCGGTGGAAAGCGCGCGGAGGAGGACGCCGTCGTGGAGGGAGGCATTTTACGGCGCAGGAATGAGGCCGGTGCAGTTGAGCCAGTTCGCCGATTATCAAGCGGAGTGTTTGCTTGCGAAGGTGCAAATCAGAGGCTTCCACGTGGACAAACGACATGCTGAGTTGGTGCTGTGCTGGCACGAACGAGCCATGGTTGCCACGTCAGCTTGGCGGTGCTAG 1641 0.5765 MRVPSSQPNNHSPTPNLLLHALPNATNTTFTYEPTSVLDLCRSPSPEKKPTVPKPDPQHNNIIATITTTTTTTNSNNNLDLDDHVLPNSDWWESIMKDLALPEDFPTPLSKPNINPCIPDFPPSHDPPFDQPPDFTSLSEIYNQNLPYNYTTTNALDHSFHDLNHHHHNTTNNVNNNWDFIEELIRAADCFDSSHFQLAQAILERLNNRLIRSPMAKPLHRAAFHFKDALQSILSRSNRAGSNRLSSMAEIVQTIKTFKAFSGISPIPMFSIFTTNQALLETLNGSSFVHVIDFEIGLGIQYASLMKEIAEKAAGASPLLRITAVVPEEYAVESRLVRENLNQFAHDLGIRAQVDFVPLRTFETVSFKAVRFVDGEKIAVLLSPTIFCRLGSGGASVGAFLADVRRMAPGVVVFVDGEGWTEATVAASFRRGVVNSLEFYSMMLESLDASVAAGGGGEWVRRIEMLLLRPKIFAAVESARRRTPSWREAFYGAGMRPVQLSQFADYQAECLLAKVQIRGFHVDKRHAELVLCWHERAMVATSAWRC 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03912 546 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 172 540 IPR005202 -
Spst3g03912 546 Pfam GRAS domain family 181 545 IPR005202 -
Spst3g03912 546 ProSiteProfiles GRAS family profile. 171 545 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03912 Spst-Chr3 89203980 89205620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03912 78 545 GRAS Transcription Factor Family AT4G36710 51.703 2.27e-156 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst3g03912 GRAS 5.6e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03912 - - gmx:100785004 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03912 3 89203980 89205620 Spst3g03912 3 89203980 89205620 ECH
Spst3g03912 3 89203980 89205620 Spst3g03912 3 89203980 89205620 PCT