Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03903 ATGGCTCCCCCCGATAAATCTGCTCCACATAACAACACACCCGATGACGCCACTCCCGATGACGCCACTCCCGATAACTCCAGTCCCGATGACGCCACTCCCGACAATGCCACACCTGATAACTCCAAACAATCACACAAGGGTTCGTCGGCCACTGAGCGCTCTTCACCATCAAAAGAGTCGCACAAATCTTTGTCGCATGAAAAGCTGACTGATTCAAAGGACAATGACAGTGCCAATAAAGCAGCTCTGGGAGCTGGGATCGGAGTAGGGTTTGTCCTGCTCGTGTTGGTCATCGTGTCGAGCAATTATTACAACAGTGGGCAGCACCCTCCCCCTAATTGGCAAGGTTCGGGTCCTCCCGGGGGTGAACATGTTGTGAGGGTTCAACAACAAGGCATGGGGATGGGGATGGGGATGGGGATGGGGATGGGGATGGGAATGGGAATGGGTCCTCCTAGTAGTGGTGGCTGGGGTGCATCACATCCTCAAATGAACAGTGGTGATATGAGCTCAAATTACTCAGTGGGAATAGGTTCCACATCGCCAGGCCTTTCTCTCTCACTCAAGGGTGGTACCTTCACTTATGAGGAGCTAGCAGCTGCCACCAAAGGATTTGCCAGTGACCAAATTATAGGACAAGGTGGCTTTGGTTATGTCCATAAGGGAGTTTTGCCTAATGGAAAGGAAGTTGCTGTTAAGAGTCTAAAAGCAGGTAGTGGACAAGGAGAGCGCGAGTTCCAAGCTGAGATTGACATCATTAGTCGTGTTCATCATCGTCATCTTGTATCGCTTGTCGGATACTGCATTTCTGGAGGCCAAAGAATGTTGGTTTATGAATTTGTTCCCAACTCAACTATGGAACATCACCTTCATGGAAAAGGCATGCCTACGATGGATTGGGCTAGTAGAATGCGAATTGCAATTGGATCTGCCAAGGGGCTTGCCTACCTTCATGAAGATTGTAGTCCTCGCATTATCCATCGTGACATTAAAGCTTCTAACGTCCTTCTTGATGATAGTTTTGAAGCAAAGGTGTCTGACTTTGGACTGGCTAAATTGACTAATGATACTAATACACATGTCTCAACTCGTGTCATGGGAACATTCGGGTACTTGGCCCCAGAATACGCATCAAGTGGAAAACTGACAGAGAAGTCTGATGTGTTCTCATTTGGAGTGATGCTATTGGAACTCATAACTGGGAAACGACCTGTGGATTTGTCAAATGCCATGGAGGACAGTTTGGTGGATTGGGCTCGACCACTCCTGAATAAAGGATTGGAGGATGGAAACTTTGGAGAGTTAGTGGATCCATTTTTGGAAGGCAATTACAATGTGCAGGAAATGACAAGAATGGCAGCTTGCGCAGCTGCAAGCATTCGTCATTCTGCCAAGAAGCGTTCAAAAATGAGTCAGATTGTAAGAGCACTGGAAGGAGATGTCTCATTGGATGACTTGAAAGATGGAATGAAGCTTGGAGGGAATGGCAATGGCAATGGCAATGGGAATGGGAATGGGAATGGGAATAGGATTGGCGGTGCTTACACTCCGTCATCTGGAAGCTCAGAATATGATACAATGCAATACAATGCTGATATGATGAAGTTCAGAAAGGCAATAATGGAGAGCCAAGAATTTAATGATAGTAGTGAGCTTACCAGTAAGGAGATGGGTTATCATTAG 1686 0.4692 MAPPDKSAPHNNTPDDATPDDATPDNSSPDDATPDNATPDNSKQSHKGSSATERSSPSKESHKSLSHEKLTDSKDNDSANKAALGAGIGVGFVLLVLVIVSSNYYNSGQHPPPNWQGSGPPGGEHVVRVQQQGMGMGMGMGMGMGMGMGMGPPSSGGWGASHPQMNSGDMSSNYSVGIGSTSPGLSLSLKGGTFTYEELAAATKGFASDQIIGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYCISGGQRMLVYEFVPNSTMEHHLHGKGMPTMDWASRMRIAIGSAKGLAYLHEDCSPRIIHRDIKASNVLLDDSFEAKVSDFGLAKLTNDTNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDLSNAMEDSLVDWARPLLNKGLEDGNFGELVDPFLEGNYNVQEMTRMAACAAASIRHSAKKRSKMSQIVRALEGDVSLDDLKDGMKLGGNGNGNGNGNGNGNGNRIGGAYTPSSGSSEYDTMQYNADMMKFRKAIMESQEFNDSSELTSKEMGYH 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03903 561 MobiDBLite consensus disorder prediction 11 55 - -
Spst3g03903 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 326 338 IPR008271 GO:0004672|GO:0006468
Spst3g03903 561 MobiDBLite consensus disorder prediction 497 522 - -
Spst3g03903 561 SUPERFAMILY Protein kinase-like (PK-like) 186 478 IPR011009 -
Spst3g03903 561 MobiDBLite consensus disorder prediction 1 76 - -
Spst3g03903 561 FunFam proline-rich receptor-like protein kinase PERK1 184 281 - -
Spst3g03903 561 MobiDBLite consensus disorder prediction 493 522 - -
Spst3g03903 561 MobiDBLite consensus disorder prediction 56 76 - -
Spst3g03903 561 ProSiteProfiles Protein kinase domain profile. 206 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03903 561 SMART serkin_6 206 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03903 561 ProSitePatterns Protein kinases ATP-binding region signature. 212 234 IPR017441 GO:0005524
Spst3g03903 561 Gene3D Transferase(Phosphotransferase) domain 1 282 489 - -
Spst3g03903 561 Gene3D Phosphorylase Kinase; domain 1 181 281 - -
Spst3g03903 561 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 115 540 IPR047117 -
Spst3g03903 561 Pfam Protein tyrosine and serine/threonine kinase 209 407 IPR001245 GO:0004672|GO:0006468
Spst3g03903 561 FunFam Proline-rich receptor-like protein kinase PERK1 282 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03903 Spst-Chr3 89083623 89087029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03903 194 552 Trihelix Transcription Factor Family AT1G70460 60.833 3.82e-151 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Spst3g03903 PK_Tyr_Ser-Thr 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03903 - - gmx:100805872 785.023