Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03884 ATGTCGTTCACACCAAGCACCCATCAAGAGGTAAAATTTGGCATGTGTTTGTCTACACTTGAGCATGTTGAAGATGAAATAAATCCATATATGAGTACTCATGACTTGAAATTTCATTCCATACATACATTCAGATGGAATCATCTTGGACCCAAAGGCAAAACAAAGAATTTGAAAAAGCCCTGGCTAAATATGATAGAGAAACCCCAGATAGGTGGCAGAATATTGCCAACGAGGTGGGAAAATCGGTGGAGGAGGTTAAAAGGCAATTTGAGATCCTCAAAGAAGATGTCCGACGCATTGAACGTGGTCAAGTGCCATTCCCCTACAGAACAAACAATTCTAACAGTAATTAAGGCATTGGAATCCAACAACACAGAAGGGAATTTGGAAGCGATGGGGTGGTATTATGGTGGTGGGGGGAGAAGTGGAGCACCGTATCTGAAGAAAGGAACGGGACGGGTCACTTTATCTCCAGTGTCCTTTTGGGAGATATATTCCTCCACCAGGTTCAAACCCCCACACACCACCACCACCTTTTCTCCTACTTATAAGGAGCTACGTTGGTCACCTCTTTCCCATGCCTCCTCTTCATTCCCTTCACCAAAACATTGTATAATCGTTCTTTTCTTACCCTTCTGCCCTCCCTCACTGCCTCTTAATTTGCTTAGTGAATACAAAACTAAGGTTACCCACCCAATGGCATCGTCTTGGACTCATAGGCAGAACAAATTGTTTGAACAAGCCCTGGCTTTATATGACAGGGAAACCCCTGACAGATGGCAGAATGTTGCCAATGTGGTGGGAAGATCAGTAGAGGAGGTCAAAAGGCACTACGAGATCCTCAAAGAAGATGTCAAACGCATTGAACATGGCCAAGTACCCTTTCCTCGTTACAAAACCAACAGCAGCAGCAACTAA 921 0.4408 MSFTPSTHQEVKFGMCLSTLEHVEDEINPYMSTHDLKFHSIHTFRWNHLGPKGKTKNLKKPWLNMIEKPQIGGRILPTRWENRWRRLKGNLRSSKKMSDALNVVKCHSPTEQTILTVIKALESNNTEGNLEAMGWYYGGGGRSGAPYLKKGTGRVTLSPVSFWEIYSSTRFKPPHTTTTFSPTYKELRWSPLSHASSSFPSPKHCIIVLFLPFCPPSLPLNLLSEYKTKVTHPMASSWTHRQNKLFEQALALYDRETPDRWQNVANVVGRSVEEVKRHYEILKEDVKRIEHGQVPFPRYKTNSSSN 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03884 306 CDD SANT 237 283 IPR001005 -
Spst3g03884 306 FunFam Transcription factor SRM1 231 296 - -
Spst3g03884 306 SUPERFAMILY Homeodomain-like 236 290 IPR009057 -
Spst3g03884 306 SMART sant 234 285 IPR001005 -
Spst3g03884 306 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 232 305 IPR044636 GO:0003700
Spst3g03884 306 Gene3D - 234 296 - -
Spst3g03884 306 ProSiteProfiles SANT domain profile. 233 287 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03884 Spst-Chr3 88859999 88870304 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03884 - - lja:Lj4g3v0973380.1 140.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03884 3 88859999 88870304 Spst3g03884 3 88859999 88870304 ECH
Spst2g02525 2 24827218 24828443 Spst3g03884 3 88859999 88870304 ECH