Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03864 ATGTTGAATCTGTTGGTGAGAGAAGAGGTACTATTGGTAGTGCAGAACTGTTACGACATAATCTTGGTCGCATTATTCACTGTAGGAGTAACATATTTGGCTTCAAAAGCTTGGAAAAGAGCTACCACAAACAATAGAGAAGAAATTCCTGGGAGGTTGGGATTGCCTTTTGTTGGGGAAACTTTTTCTTTTCTTTCAGCCACTAAAAGCACAAGGGGATGCTATGATTTTGTCAGACTTAGGCGATTGTGGAATGGGAGATGGTTCAGGACAAGGCTATTCGGGAAGATTCACATATTTGTTCCAACGCCTGAAGGAGCAAGGACCATATTTGCTAATGACTTTGTTCTATTCAACAAGGGTTATGTAAAATCAATGGCAGATTCCGTGGGAGAGAAAAGCTTGCTATGTGTACCCGTTGAGAGTCACAAAAGAATAAGGCGTCTTCTATCCGAACCATTTTCCATGACTTCCCTATCTGCATTTGTCACCAAATTTGACAAAATGTTGTGTGGAAGGCTGCAAAAGCTAGAACAAAACGGGAAAAGTTTCAAGGTGTTGGACTTTTGTATGAAGATGACATTTGATGCAATGTGTGATATGCTGATGAGCATCACGGAGGATTCATTACTACGACAGATCGAAGAAGACTGCACCGCCGTCTCTGACGCCATGTTATCCATTCCCATCATGTTTCCTTGTACCAGATACCATAAAGGCATCACGGCTCGTAAAAGGCTCATGGAAACCTTCAGAGAAATCATTTCCAGACGTAGGAGGGGACAAGAAACTCCAGAAGACTTCCTTCAGTCCATGTTGCAGAGAGACTCACTCCCACCCAGTGAAAAGCTTGATGACTCGGAGATTATGGATAATCTGTTGACCTTGATAATTGCTGGACAAACAACCACGGCAGCAGCAATGATGTGGAGCGTAAAGTTTCTACATGACAACAGAGAAGCACAGGACATACTCAGGGAAGAACAGTTATCTATAGCCAAAATGAAACCAGACGGAGCCTCGATCAACTATGAAGATCTCAATAATATACGTTATGGTTTGAAGGTAGTCAAGGAAACATTGAGAATGTCCAATGTCCTACTATGGTTTCCTCGTGTCGCACTTCAAGACTGCACGATCGAAGGGTATAACATAAAGAAAGGTTGGCATGTTAACATCGATGCAACTTACATACACAACGACTCCGATTTGTACAAGGATCCGTTGAAATTCAACCCGCAAAGATTTGATGAAATGCAAAAGCCGTACAGTTTCATACCTTTCGGATCAGGGCCTAGGACATGCCTTGGGATCAATATGGCGAAAGTGACAATGTTGGTCTTTGTACACAGACTCACTGGAGGTTACACGTGGACGCTTGATGATTTAGATACTTACTTAGAAAAGAAGGCACACATACCTAGGCTAAGGAGTGGTTGCCCAATAACTTTGAAGTCCTTAAGCAAAACCATGCTAGAGGCATAA 1485 0.4242 MLNLLVREEVLLVVQNCYDIILVALFTVGVTYLASKAWKRATTNNREEIPGRLGLPFVGETFSFLSATKSTRGCYDFVRLRRLWNGRWFRTRLFGKIHIFVPTPEGARTIFANDFVLFNKGYVKSMADSVGEKSLLCVPVESHKRIRRLLSEPFSMTSLSAFVTKFDKMLCGRLQKLEQNGKSFKVLDFCMKMTFDAMCDMLMSITEDSLLRQIEEDCTAVSDAMLSIPIMFPCTRYHKGITARKRLMETFREIISRRRRGQETPEDFLQSMLQRDSLPPSEKLDDSEIMDNLLTLIIAGQTTTAAAMMWSVKFLHDNREAQDILREEQLSIAKMKPDGASINYEDLNNIRYGLKVVKETLRMSNVLLWFPRVALQDCTIEGYNIKKGWHVNIDATYIHNDSDLYKDPLKFNPQRFDEMQKPYSFIPFGSGPRTCLGINMAKVTMLVFVHRLTGGYTWTLDDLDTYLEKKAHIPRLRSGCPITLKSLSKTMLEA 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03864 494 Gene3D Cytochrome P450 38 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03864 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Spst3g03864 494 CDD CYP90-like 79 484 - -
Spst3g03864 494 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03864 494 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03864 494 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03864 494 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03864 494 Pfam Cytochrome P450 53 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03864 494 FunFam cytochrome P450 90A1-like isoform X1 39 487 - -
Spst3g03864 494 SUPERFAMILY Cytochrome P450 47 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03864 494 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03864 494 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03864 494 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03864 494 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03864 494 PANTHER CYTOCHROME P450 26 49 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03864 Spst-Chr3 88695391 88699298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03864 50 459 Cytochrome P450 AT1G19630 45.894 2.60e-125 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03864 - - gmx:100789430 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03864 3 88695391 88699298 Spst3g03864 3 88695391 88699298 ECH