Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03849 ATGCGAAATGAGAACGCCACCGCCGGCGCAGCCGCAGCCGCAGGGTTCACAGCCGTGGTTGTTATGCATCCCCTTGATGTCGTTCGAACTAGGTTCCAAGTTAACGATGGTCGAGTGTCGCATCTTCCCAGTTATAAGAACACTGCTCACGCCGTTTTCACCATTACTCGCTCCGAGGGATTAAGAGGTTTATATGCAGGCTTTCTTCCTGGGGTTCTTGGGTCTAGTATTGCGTGGGGTTTATATTTCTTTTTCTATGACAAAGCCAAAAAAAGATATGCAAGAAACAGTGAGGGGAAGTTGAGCCCAGGTTTTCATCTTGCCTCAGCTGCTGAAGCAGGAAGTTTGGTTTGCTTGTGCACAAATCCTGTGTGGCTAGTAAAGACAAGATTGCAGCTTCAAACTCCAATTCATCAGATCCGTCCATACTCTGGGCTTTATGATGCATTTAGGACCATAATGAGGGAAGAAGGAGTGAGTGCACTTTACAAAGGGATTGTTCCTAGTCTGTTTCTGGTTTCTGTTGGTGCTATTCAGATCACAGCATATGAGCAGCTACGTAAAGTTGTTGTTGATTTTAAGAGTAAGAGAATTACAATACATAATCAAAACCCTGATAAATTACTGAATTCTGCCTATTATGCTGTTCTTGGAGCAACATCAAAACTTGCTGCAATACTGCTAACCTATCCATTTCAGGTTATACGAACCCGATTGCAGCAACGACCTAGTGATGATGGGGTTCCAAGATATATGGGCACTTGGCATGTTGTGAAAGAAACTGCACGATTTGAAGGTGTACGGGGTTATTACAAAGGAATTACCGCAAACCTGTTGAGAAATGCTCCTGCTTCTTCAATAATATTTATTGTGTATGAAAATGTTCTAAAATACCTTAAACCGTCTAGAAGGAATGACTGA 921 0.4289 MRNENATAGAAAAAGFTAVVVMHPLDVVRTRFQVNDGRVSHLPSYKNTAHAVFTITRSEGLRGLYAGFLPGVLGSSIAWGLYFFFYDKAKKRYARNSEGKLSPGFHLASAAEAGSLVCLCTNPVWLVKTRLQLQTPIHQIRPYSGLYDAFRTIMREEGVSALYKGIVPSLFLVSVGAIQITAYEQLRKVVVDFKSKRITIHNQNPDKLLNSAYYAVLGATSKLAAILLTYPFQVIRTRLQQRPSDDGVPRYMGTWHVVKETARFEGVRGYYKGITANLLRNAPASSIIFIVYENVLKYLKPSRRND 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03849 306 Gene3D Mitochondrial carrier domain 96 306 IPR023395 -
Spst3g03849 306 Gene3D Mitochondrial carrier domain 3 95 IPR023395 -
Spst3g03849 306 SUPERFAMILY Mitochondrial carrier 8 294 IPR023395 -
Spst3g03849 306 Pfam Mitochondrial carrier protein 10 96 IPR018108 -
Spst3g03849 306 Pfam Mitochondrial carrier protein 212 300 IPR018108 -
Spst3g03849 306 Pfam Mitochondrial carrier protein 103 191 IPR018108 -
Spst3g03849 306 FunFam Folate transporter 1, chloroplastic 98 304 - -
Spst3g03849 306 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 4 301 IPR044712 GO:0006862|GO:0055085
Spst3g03849 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 92 IPR018108 -
Spst3g03849 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 298 IPR018108 -
Spst3g03849 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 101 189 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03849 Spst-Chr3 88527319 88542657 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03849 24 300 Chloroplast and Mitochondria Gene Families AT1G25380 35.816 3.25e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03849 K15115 - gmx:100809599 509.605