Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03836 ATGGAATGGATTATGGGAGTATGGACTCTGATGGGTATCCTTATATCTTGGTGGTATTGGTTTCTGTGTCTGAAAAAGGAGAACAGTAATAGGGTGAAGCAGCAGAAGAAGAAGAAGAAGGGGAAAGTTCCTAAAGGGAACACAGGTTGGCCTTTACTTGGAGAGACCCTTGAGTTCATTGCTTGTGGCTATACCTCCAACCCTGTCAGCTTCATGGAAAAGCGCAAGTCTCTCTTCTATAGAGAGAATAGCATATCCAAAGAAGGAAAAGCAGAAAAGCCTGCTTCTGCCATAACTGGAGCTATTCTAGATTCACCTTTGGACTGTAGTGGGTATGGTAATGTATTTAAGACAAGCATTTTGGGAACTGGTGTGATTGTGTCGACAGACCCAGAAGTGAACAAAGTGATTCTGCAGAACCAGGGGAACATATTCGTCCCTGCATATCCAAAATCGGTCAGAGAACTAATGGGAGAACACTCTATCCTCCAAATGAACGGGAACATGCATAGGAAAATCCACTCACTCCTTGGAGGGTTCCTACGATCCCCTCAATTCAAAGCTCGAATCACTAGAGATATTGAACACTCTGTTAAACAGTGCTTTGCAACTTGGACCCACCAACCAATTTACGTTCAAGATCAAGTAAAAAAGATCACATTTACTATTTTGGTTAAAGTTCTACTGAGCATTGGTCCCGGTGAAGATTTAGACTTCTTGAAGAGAGAATTTGAAGAGTTCATAAAAGGGTTGATTTGCTTACCCCTCAAGTTTCCTGGAACAAGACTATATAAATCCTTGAAGGCTAAGGAAAGAATGATGAAGATAGTGCAGAGGGTAATAGAGGAGAGGAACAATAATATCCATAACAATAAGGATTCAGAAGAGAAGGAAGGTGCAGCAAATGATGTGGTGGATGTGCTCTTAAGGGATATTGGTGATAGCAACACTGTCTCTGACATGTTGGAAAACATCTGTGAGAACATAATTGAGATGATGATCCCTGGGGAGGAAACTCTTCCCACAGCTATGACCATGTCTGTCAAATTTCTCAGTGACTATCCCCTTGCTCTATCCAAATTACTGGAAGAGAACATGGAATTGAAGAGGAAGAAGAATAGTTCGGATGATTATGTATGGAGTGACTACCTTCAGCTTCCATTTACTCAAAATGTTATCAGCGAAACTCTTAGAATGGCAAATATTGTCAATGCCATTTGGAGAAAATCAGTGAAAGACGTAGAAATTAAAGGGTATTTAATTCCTAAGGATTGGTGTGTTGTGGCATCTCTTACTTCTGTTCATATGGATGGCATGAATTATGAAAACCCTTTTAAGTTTGATCCTTGGAGATGGGAGAAAACTGGAGCTGGGGCTAATAGGAATTGCTTTACACCATTTGGTGGTGGACAGAGACTGTGCCCTGGCATAGAACTCTCAAGGCTAGAGCTCTCTATTTTCCTTCACCATCTTGTTACTACTTACAGATGGGTTGCTGAGAAGGATGAAATCATCTACTTTCCAACAGTTAAGATGAAGAGGAAGCTCCCAATTAGTGTAACAACCATTAACACCTAA 1578 0.4094 MEWIMGVWTLMGILISWWYWFLCLKKENSNRVKQQKKKKKGKVPKGNTGWPLLGETLEFIACGYTSNPVSFMEKRKSLFYRENSISKEGKAEKPASAITGAILDSPLDCSGYGNVFKTSILGTGVIVSTDPEVNKVILQNQGNIFVPAYPKSVRELMGEHSILQMNGNMHRKIHSLLGGFLRSPQFKARITRDIEHSVKQCFATWTHQPIYVQDQVKKITFTILVKVLLSIGPGEDLDFLKREFEEFIKGLICLPLKFPGTRLYKSLKAKERMMKIVQRVIEERNNNIHNNKDSEEKEGAANDVVDVLLRDIGDSNTVSDMLENICENIIEMMIPGEETLPTAMTMSVKFLSDYPLALSKLLEENMELKRKKNSSDDYVWSDYLQLPFTQNVISETLRMANIVNAIWRKSVKDVEIKGYLIPKDWCVVASLTSVHMDGMNYENPFKFDPWRWEKTGAGANRNCFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYRWVAEKDEIIYFPTVKMKRKLPISVTTINT 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03836 525 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03836 525 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03836 525 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03836 525 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03836 525 PRINTS E-class P450 group I signature 109 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03836 525 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03836 525 PANTHER CYTOCHROME P450 26 40 498 - -
Spst3g03836 525 Pfam Cytochrome P450 112 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03836 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Spst3g03836 525 Gene3D Cytochrome P450 31 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03836 525 CDD CYP90-like 112 521 - -
Spst3g03836 525 SUPERFAMILY Cytochrome P450 42 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03836 525 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 104 523 - -
Spst3g03836 525 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03836 525 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03836 525 PRINTS P450 superfamily signature 182 195 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03836 525 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03836 Spst-Chr3 88354326 88360392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03836 25 496 Cytochrome P450 AT3G13730 48.101 5.96e-158 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03836 K12637 - gmx:100812489 860.136