Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03835 ATGGAAATTGGTGGGGAACTAAGAGAGTTGAGGGAATACTTCAAAACTGGAAAAACCAAAAGTGTGACATGGAGGAAAAGCCAGCTCACAGCTATCTTAGACCTTATTCATGAAAATGAAGATGCTATATCTAAGGTCCTCCATCAAGATCTTGGGAAGCACCCTGTTGAGGCTTTCCGAGATGAGATTGGAGGGGTAGAAAAATCAGCCAGCAAATCTTTGAGCTGTGTTGAGAAATGGATGACACCTAAGAAGAATGATATCCCTTTGCTTTTCTTTCCAGCTAAAGGAGAAGTTTTGTCAGAACCACTGGGTGTGGTTCTCATCTTTTCTTCTTGGAACTTCCCAATAATATTGGCTTTGGATCCATTAATTGGGGCCATATCTGCTGGAAATGTTGTAGTCATAAAACCTTCAGAGCAAGCTCCAGCTTGCTCTTCTTTCCTTGCCAATACCATTCCTCGCTACTTAGACTCTAATGGCATCAAGGTGATTGAGGGCGGAGCAGATGTTTGTGAACAACTACTGCTACAAAAATGGGACAAAATATTCTTCACTGGAAGTCCACGGGTGGCAAGCGTAGTCATGTCTGCTGCAGCAAAGAATTTAACTCCTGTTACTCTAGAGTTAGGTGGAAAATGCCCTGCCATACTTGATTCCCTTCCCAATCCTTCAGAATTTAAGTTCGCAGTCAAAAGAATTGTAGGAGGAAAGTGGGGACCTTGCAGTGGACAAGCTTGCATAGGAGTAGACTATTTGCTTGTTGAGGAGAGGTTCTCTTCTTCTCTGATAGAGCTATTCAAGAAGATAATCAGAAGATTTTATGGTGAAAACCCACTGGAGTCAAATGTACTTTCGAGAATAGTAAACAAGCATCAGTTTGAGAGAATACGCAATCTTCTCGAAGACCCTCTTGTTGCTGCTTCCATCGTTCATGGCGGTTTGGTCGATGAAGAAAACCTGTTCATCGAGCCTACAATCTTGTTAGATCCTCCACTAGATTCTCAGATAATGACAGAAGAAATATTTGGTCCACTGCTCCCTATAATCACACTGAATAACATTCAAGAAAGTATTGAATTTATCAATGCAAAACCGAAACCGCTTGCCATTTATGCCTTCACCAAAGATGAAACTTTCAAGAGAAAAATTCTATCGGAAACATCCTCAGGAAGTGTCATATTCAATGACACATTGGTTCAATTTCTATGTGATACGCTACCATTTGGAGGTGTTGGGCAGAGTGGTTTTGGAAGGTACCATGGGAAGTACTCTTTTGACACTTTCAGCCATGAAAAGGCAGTAATGCACAGAAAACTGTTCCTTGAAATTGAGCCAAGGTACCCTCCTTGGTCTAGGTTCAAGCTAGAGTTTCTGAAATTGGCATACAGGCTGAACTACTTTGGACTACTACTGCACATGATGGGCTTCAAACTCGGCTTGAAAAGATACAACTAG 1458 0.4163 MEIGGELRELREYFKTGKTKSVTWRKSQLTAILDLIHENEDAISKVLHQDLGKHPVEAFRDEIGGVEKSASKSLSCVEKWMTPKKNDIPLLFFPAKGEVLSEPLGVVLIFSSWNFPIILALDPLIGAISAGNVVVIKPSEQAPACSSFLANTIPRYLDSNGIKVIEGGADVCEQLLLQKWDKIFFTGSPRVASVVMSAAAKNLTPVTLELGGKCPAILDSLPNPSEFKFAVKRIVGGKWGPCSGQACIGVDYLLVEERFSSSLIELFKKIIRRFYGENPLESNVLSRIVNKHQFERIRNLLEDPLVAASIVHGGLVDEENLFIEPTILLDPPLDSQIMTEEIFGPLLPIITLNNIQESIEFINAKPKPLAIYAFTKDETFKRKILSETSSGSVIFNDTLVQFLCDTLPFGGVGQSGFGRYHGKYSFDTFSHEKAVMHRKLFLEIEPRYPPWSRFKLEFLKLAYRLNYFGLLLHMMGFKLGLKRYN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03835 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 11 433 IPR016162 GO:0016491
Spst3g03835 485 PANTHER ALDEHYDE DEHYDROGENASE 4 475 IPR012394 GO:0006081
Spst3g03835 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 212 415 IPR016163 GO:0016620
Spst3g03835 485 PIRSF ALDH 2 476 IPR012394 GO:0006081
Spst3g03835 485 FunFam Aldehyde dehydrogenase 212 415 - -
Spst3g03835 485 SUPERFAMILY ALDH-like 8 450 IPR016161 GO:0016491
Spst3g03835 485 Pfam Aldehyde dehydrogenase family 12 435 IPR015590 GO:0016491
Spst3g03835 485 FunFam Aldehyde dehydrogenase 11 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03835 Spst-Chr3 88348205 88351728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03835 7 478 Aldehyde Dehydrogenase Gene Family AT4G36250 62.076 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03835 K00128 - gmx:100809812 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03835 3 88348205 88351728 Spst3g03835 3 88348205 88351728 ECH