Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03828 ATGGGGTTCCTCCACATGGTCGTCATTTCAAACGCGGAAGCGGCGCGTGAAGTGCTCCAAGTCCAAGACAACATCTTCTCCAACCGCCCCGCCACCATAGCCATCAGGTACCTAACCTACGACCGCGCCGACATGGCTTTCGCACACTACGGTCCCTTCTGGCGCCAGATGCGCAAAATCTGCGTCGTCAAACTCTTCAGCCGCAAGCGCGCGGAGTCCTGGAACTCCGTGAGAGGTGAAGTCGACACCATCGTCCGCACCATTGCGGCGAACGTGGGCGACCCCATTAACGTGGGAGAAGTGGTGTATTATCTCACCAAGAACATCGTGTATCGTGCGGCTTTAGGGTCTGGTTGCCGGGAGCGCCAAGCTGAGTTCATTTCAATTCTGGAGGAGTTTTCGAAGTTGTTTGAAGCCTTCAACATTGCGGACTTTATCCCGTGTCTTTGGTGGGTTGATCCTCAGCATCTGAACAAGAGACTGATCAAGGCACGTGCCGCGTTGGATGGTTTCATTGACAAGATCATTGACGAGCACGTGGAGAAGAGGAGACGCGACATTTGTGAGGGAGAGAGTGACATGGTTGATGGGTTGCTGAACTTTTACAGTGAAGAGGCTAAGCTCAACAATGATTCCGTCGAGCAGCAGAATGCCATGAGAGTAACCAAGGATAACATCAAAGCTGTTATCATGGACGTGATGTTCGGAGGGACCGAAACAGTGGCGTCGGGAATCGAGTGGACAATGGCGGAGCTAATGCGAAGCCCAGAGGAGCTACGGCGAGAGATGCTGCGGCTGCACCCGCCAATTCCGCTTCTACTCCACGAGACGGCGGAGAACGCGGCGGTGTGTGGGTACCACGTGCCGAAAGGGGCGCGCGTGATCATAAACGTGTGGGCCATCGGGAGGGACAAGGGCACGTGGGAGGAGCCCGAAGCGTTCAAGCCGTTGCGGTTTCTGAACCCGGAGGCGCCGAATTTCGAAGGGAGCGACTTCGAATTCATTCCATTCGGGTCGGGCCGTAGATCCTGCCCCGGAATGCAACTGGGTCTGTACGGGCTGGAAGTGGCGGTGGCGCACTTGCTTCACTCCTTCACTTGGGAGTTACCCAATGGGATGAAACCCAGCGAGTTGGACACGAGCGACGTGTTCGGACTCGCCGCTCCCAGGGCGAGTCGACTCGTGGCGATTCCAACTAAGCGTTTGATGTGCCCTCTCTAG 1221 0.5618 MGFLHMVVISNAEAAREVLQVQDNIFSNRPATIAIRYLTYDRADMAFAHYGPFWRQMRKICVVKLFSRKRAESWNSVRGEVDTIVRTIAANVGDPINVGEVVYYLTKNIVYRAALGSGCRERQAEFISILEEFSKLFEAFNIADFIPCLWWVDPQHLNKRLIKARAALDGFIDKIIDEHVEKRRRDICEGESDMVDGLLNFYSEEAKLNNDSVEQQNAMRVTKDNIKAVIMDVMFGGTETVASGIEWTMAELMRSPEELRREMLRLHPPIPLLLHETAENAAVCGYHVPKGARVIINVWAIGRDKGTWEEPEAFKPLRFLNPEAPNFEGSDFEFIPFGSGRRSCPGMQLGLYGLEVAVAHLLHSFTWELPNGMKPSELDTSDVFGLAAPRASRLVAIPTKRLMCPL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03828 406 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 337 346 IPR017972 GO:0005506|GO:0016705
Spst3g03828 406 PRINTS E-class P450 group I signature 334 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03828 406 PRINTS E-class P450 group I signature 344 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03828 406 PRINTS E-class P450 group I signature 14 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03828 406 PRINTS E-class P450 group I signature 225 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03828 406 PRINTS E-class P450 group I signature 297 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03828 406 PRINTS E-class P450 group I signature 245 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03828 406 PANTHER CYTOCHROME P450 84A1-RELATED 1 261 - -
Spst3g03828 406 SUPERFAMILY Cytochrome P450 1 401 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03828 406 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03828 406 PRINTS P450 superfamily signature 335 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03828 406 PRINTS P450 superfamily signature 258 269 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03828 406 PRINTS P450 superfamily signature 236 253 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03828 406 Pfam Cytochrome P450 261 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03828 406 Pfam Cytochrome P450 2 257 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03828 406 Gene3D Cytochrome P450 1 260 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03828 406 Gene3D Cytochrome P450 261 391 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03828 Spst-Chr3 88280715 88283260 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03828 1 406 Monolignol Biosynthesis Gene Families AT4G36220 62.670 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03828 K09755 - gmx:100807448 642.114