Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03826 ATGGATTTGCTCATACAACTGAAAACGGCACTGGAACCGTTCCCTACGACGGTCTTGTACATAATCCCGGTGACGTTGCTGCTGATGGGTTTACTGTCACGAATTCGCAGAAAAACGGCGCCGTATCCACCGGGGCCAAAAGGCCTACCCATCATAGGCAACATGAACATCATGGACCAGCTCACACACAGAGGCTTGGCCAAACTCGCCAAGCAATACGGCGGCGTTTTGCACCTCCGCATGGGGTTCCTCCACATGGTCGCCATTTCAAACGCGGAAGCGGCGCGTGAAGTGCTCCAAGTCCAAGACAACATCTTCTCCAACCGCCCCGCCACCATAGCCATCAGGTACCTAACCTACGACCGCGCCGACATGGCTTTCGCACACTACGGTCCCTTCTGGCGCCAGATGCGCAAAATCTGCGTCGTCAAACTCTTCAGCCGCAAGCGCGCGGAGTCCTGGAACTCCGTGAGAGACGAAGTCGACACCATCGTCCGCACCGTTGCGGCGAACGTGGGCAACCCCGTTAACGTGGGGGAACTAGTGTTCAACCTGACGAAAAACATCATCTACCGCGCGGCTTTCGGGTCCAGTTCCAAAGAGGGACAGGACGAGTTCATTTGGATTTTTCAAGAGTTTTCCAAGTTGTTTGGGGCTTTCAATATTGCGGACTTTGTGCCTTGCCTCGGGTGGGTTGATCCTCAGTGTCTCAACGACAGACTCGTGAAGGCACGTGCCGCCTTGGATAACTTCATTGATAACATCATTGAGGAGCACGTGGAGAAGAAGAGGAGTAGTGGCAAGAGTTGCGACGATGAAAGTGACATGGTTGATGAGTTGTTGAACTTTTACAGCCAAGAGGCTAAATTGAATAATGAATCGGAGGACCTTCACAACTCCATCAGACTCACCAGAGACAACATCAAAGCCATCGTCATGGACGTGATGTTCGGTGGGACTGAAACGGTGGCATCGGGAATCGAGTGGGCAATGGCGGAGCTCATGAGAAGCCCTGAAGACCTTCGGCGCGTGCAGCAAGAACTCGCTGACGTGGTGGGACTGGACCGGCGCGTGGACGAGTCGGACCTCGAAAAGCTCATATTTCTAAAATGTGCGGTGAAGGAGGCGCTGCGAATGCACCCGCCGATTCCTCTTCTCCTCCACGAGACAGCAGAGGACGCCACTGTGTGCGGGTTCCACGTGCCGAAGAAGTCGCGCGTGATCATAAACGCTTGGGCCATAGGAAGGAACGCGGACTCATGGGAAGAGCCGGAGGCGTTTAAGCCGTCACGGTTTCTGAACCCGGGCGTGCCCGATTTCAAAGGGATGAACTTCGAGTTCATTCCGTTCGGTTCAGGTCGGAGATCCTGCCCCGGAATGCAACTGGGTCTTTACGCGCTGGAAGTGGCCGTGGCGCACTTGCTTCACTGCTTCAGGTGGGAGTTACCTGATGGGATGAAACCCAGCGAGTTGGACACCAGCGATGTGTTCGGACTCACCGCGCCCAGAGCTAGTCGACTCGTCGCGATTCCATCCAAACGTGTGTTATGTCCTCTCTGA 1560 0.5487 MDLLIQLKTALEPFPTTVLYIIPVTLLLMGLLSRIRRKTAPYPPGPKGLPIIGNMNIMDQLTHRGLAKLAKQYGGVLHLRMGFLHMVAISNAEAAREVLQVQDNIFSNRPATIAIRYLTYDRADMAFAHYGPFWRQMRKICVVKLFSRKRAESWNSVRDEVDTIVRTVAANVGNPVNVGELVFNLTKNIIYRAAFGSSSKEGQDEFIWIFQEFSKLFGAFNIADFVPCLGWVDPQCLNDRLVKARAALDNFIDNIIEEHVEKKRSSGKSCDDESDMVDELLNFYSQEAKLNNESEDLHNSIRLTRDNIKAIVMDVMFGGTETVASGIEWAMAELMRSPEDLRRVQQELADVVGLDRRVDESDLEKLIFLKCAVKEALRMHPPIPLLLHETAEDATVCGFHVPKKSRVIINAWAIGRNADSWEEPEAFKPSRFLNPGVPDFKGMNFEFIPFGSGRRSCPGMQLGLYALEVAVAHLLHCFRWELPDGMKPSELDTSDVFGLTAPRASRLVAIPSKRVLCPL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03826 519 PANTHER CYTOCHROME P450 84A1-RELATED 16 519 - -
Spst3g03826 519 Gene3D Cytochrome P450 35 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03826 519 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03826 519 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03826 519 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03826 519 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03826 519 FunFam Cytochrome P450 84A1 35 513 - -
Spst3g03826 519 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03826 519 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03826 519 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03826 519 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03826 519 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03826 519 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03826 519 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03826 519 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03826 519 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03826 519 Pfam Cytochrome P450 43 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03826 519 SUPERFAMILY Cytochrome P450 43 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g03826 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Spst3g03826 519 CDD CYP71-like 72 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03826 Spst-Chr3 88233377 88235830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03826 50 519 Monolignol Biosynthesis Gene Families AT4G36220 73.573 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03826 K09755 - gmx:100807448 904.049