Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03816 ATGAGACTGGTTCCTTTCCTGCACCAAAGATGTTGGAATAACCCAACCCAGCTCACTCCTCACTCTCTTCCTCCCTGCACTACCATGACTAAATTTCTCATCCTTCTTCTATTGTGCGCTGGCTTCTTATCATGCGCCCAGTGTGGCTCCGTCACCGAGATTCAAGCCTTAACGTCGTTCAAGCTCAACCTTCACGACCCTCTCGGCGCGCTAAACGCCTGGGACCCGTCAACGCCATTAGCTCCGTGCGACTGGCGCGGCGTTTCCTGCCAAAACGACCGAGTCACTGAGTTACGTCTGCCGCACCTTCAACTCAGTGGCCAACTCGCTGACCGCATTTCAGACCTACGCATGCTTCGAAGGCTAAGCCTTCGTTCCAACTCCTTCAACGGCACCATTCCCCGCTCCCTCTCCAAATGCACGCTCCTACGCGCCTTGTTCCTGCAGTACAACGACCTCTCCGGCCAGCTCCCGTCGGAAATCGGAAACCTCGCCGCTCTCCAGATTCTCAACGTTGCTGGGAACAACCTCTCCGGCGAAATCCCCGCCGAACTCCCCCTCCGTCTCAAATACATCGACCTCTCCGCCAACGCCTTCTCCGGTGAGATTCCGAGCACCATCGCCGGTCTTTCCGAGCTTCAGCTTATCAACCTCTCCTACAACGAGTTCTCCGGCCAGATTCCAGCGCGCATCGGAGAGCTTCAGAATCTGCAATACCTTTGGCTCGATCACAATGTTATCGGCGGAACCTTACCTTCGTCTCTCGCGAATTGTTCCTCGCTCGTGCATTTGAGCGTCGAAGGGAACGCGCTCGCCGGCGTGTTACCGGCTGCTATTGCGGCTCTGCCGAACCTCAAGGTATTGTCCCTTGCGCAGAACAGCTTCACCGGCACCGTTCCGGCTTCCGTTTTCTGCAACGTGTCACTCAAAGCGCCGTCACTTCGCATCGTTCAGTTAGGGTTAAACGATTTCACGGGTTTCGCGTGGCCTCAAGCCGCCACGTGTTTCAGTGTTCTTGAGGTTTTGAATATTCAGCGAAATAGCGTGCGCGGCATGTTTCCGATGTGGTTAACCAACTTGACCACGTTGTCGGTTCTCGATATTTCCGGTAACGCACTTTCCGGTGATATTCCGCCAGAAATTGGAAGTCTTTGGAAATTGGAAGAGCTGAAGATGGCCAATAATTCGTTCTCAGGCTATATTCCGCCAGATATCGTAAAATGTAGGTCCTTGCGTGTTGTTGATTTGGAAGGAAACCGATTTTCCGGGGAGATTCCTTCGTTTATAGGAAATCTGACAGCGCTGAAGGTTCTCTCTCTTGGTGTGAACCATTTCTCTGGTTCGGTTCCGGTGAGTTTTGGTGGGCTTGTTTCTCTTGAAACGTTGAGTTTAAGGGGTAATAGATTGAATGGTACAATGCCAGAGGAAGTGATGGGGTTGAAGAATTTGACAGTGTTGGACCTCAGTGGAAACCAGTTTTCGGGTCATGTTTCTGGGAAAATTGGGAATCTGAGTAAATTAATGGTTCTGAATCTGAGTGGTAATGGCTTCTACGGAGAAATTCCTTCTGCTTTGGGGAATCTTTTCAGGCTCACTACACTTGATTTGAGCAAACAAAATCTCTCCGGTGAATTGCCATTTGAAATTTCGGGCCTTCCCAGTTTGCAGGTCATTGCTCTTCAAGAGAACAAGTTGTCTGGGGTGATCCCTGAAGGGTTTAGCAGCTTGATCAGTTTGAAATATGTGAACCTGAGCTCTAACGAGTTTTCTGGGCATGTTCCTAAGAGCTATGGCTTCCTTCGATCGTTGGTTGTTCTTTCATTGTCTGATAACCGTATCACCGGAGTGATTGCCCCGGAAATTGGAAACTGCTCTGACATTGAAATTATCGAGCTTAGATCAAATTACTTGGGGGGTCCCATTCCAACGGATCTCTCTGGCCTTGCCCATTTGAAAGTCCTTGATTTGGGTAAGAACAATTTAACTGGGGCTTTGCCCGAGGATATCTCCAAATGCTCAGAGTTAACTGTTGTGTTAGCAGATCACAATCAACTTTCTGGTGCTATACCAGGGTCATTGGCGGAGTTGTCATCCCTAACTATGCTGGATCTCTCTGGCAACAAATTTAGTGGCGAAATCCCTAGTAATTTGAACAACATCCATGGTTTGGTGTACTTCAATGTCTCAGGCAACAACTTAGAAGGTGAGATTCCACCAATGTTGGGTTCTAAATTCAACGACTCCTCTGTATTTGCAAACAACCATAACTTGTGCGGGAAGCCATTGGATAGAAAGTGCGAAGAGACAGACAGTGGGGAGAGAAATAGGTTGATAGTGTTAATCATTATCATCGCAGTTGGAGCTTGTTTATTGGCATTGTGTTGCTGCTTCTACATCTCCAACCTTCTGAGATGGCGCAGAAGGATCAAAGCAGCAGTGTCAGGGGAGAAGAAAAAGAGTCCAAGAACAAGTTCAGGAACAAGTCAAGGTCGAAGCAGTACTGACACCAACGGACCAAAACTCGTCATGTTCAACGCCAAAATCACCCTGGCAGAAACAATCGAAGCAACAAGGCAATTCGATGAAGAAAACGTGCTGAACAGAACAAAACACGGTTTAGTATTCAAGGCCTGCTACAACGACGGAATGGTCCTTTCCATTCGCAAGCTCCAAGACGGGTCACTAGATGAAAACATGTTCAGAAAAGAAGCCGAATCGTTAGGAAAAATCAGGAACCGAAACCTAACCGTCCTCAGAGGATACTATGCAGGCCCACCGGATGTTAGACTCTTGGTCTACGATTACATGCCCAACGGGAACCTCGCAACGTTGCTCCAAGAAGCATCACACCTAGATGGTCATGTTCTCAATTGGCCAATGCGACACCTCATTGCATTAGGAATAGCCCGTGGCATAGCGTTTTTACACCAGTCCTCACTTATCCACGGTGACATCAAACCCCAAAACGTGCTCTTTGATGCAGACTTCGAAGCCCATTTATCAGATTTCGGGTTGGACAAGTTAACAGTTCCGAACCCAGTTGAAGCCTCCACTTCAAGCACTGCCTCAGTTGGCACGTTGGGTTACGTGTCCCCAGAGGCCGTGTTAACAGGGGAACCCACGAAAGAGTGTGACGTGTACAGCTATGGCATCGTGTTGCTGGAGCTTCTCACCGGGAAGAGACCAGTGATGTTCACGCAGGATGAGGATATAGTGAAGTGGGTGAAGAAACAGTTGCAGAACGGTCAAATTACAGAGCTACTAGAGCCTGGTTTGTTCGAACTTGATCCAGAGTCTTCGGAATGGGAAGAGTTCTTGCTGGGTTTGAAAGTGGGTTTGCTTTGCACAGCACCAGACCCTCTTGATCGACCAACCATGGCTGACATCGTGTTCATGCTCGAAGGTTGTCGTGTTGGGCCCGATATTGCATCTTCTGCGGAACCCACCACCCAAACTTCTCCTGTGTAA 3468 0.4896 MRLVPFLHQRCWNNPTQLTPHSLPPCTTMTKFLILLLLCAGFLSCAQCGSVTEIQALTSFKLNLHDPLGALNAWDPSTPLAPCDWRGVSCQNDRVTELRLPHLQLSGQLADRISDLRMLRRLSLRSNSFNGTIPRSLSKCTLLRALFLQYNDLSGQLPSEIGNLAALQILNVAGNNLSGEIPAELPLRLKYIDLSANAFSGEIPSTIAGLSELQLINLSYNEFSGQIPARIGELQNLQYLWLDHNVIGGTLPSSLANCSSLVHLSVEGNALAGVLPAAIAALPNLKVLSLAQNSFTGTVPASVFCNVSLKAPSLRIVQLGLNDFTGFAWPQAATCFSVLEVLNIQRNSVRGMFPMWLTNLTTLSVLDISGNALSGDIPPEIGSLWKLEELKMANNSFSGYIPPDIVKCRSLRVVDLEGNRFSGEIPSFIGNLTALKVLSLGVNHFSGSVPVSFGGLVSLETLSLRGNRLNGTMPEEVMGLKNLTVLDLSGNQFSGHVSGKIGNLSKLMVLNLSGNGFYGEIPSALGNLFRLTTLDLSKQNLSGELPFEISGLPSLQVIALQENKLSGVIPEGFSSLISLKYVNLSSNEFSGHVPKSYGFLRSLVVLSLSDNRITGVIAPEIGNCSDIEIIELRSNYLGGPIPTDLSGLAHLKVLDLGKNNLTGALPEDISKCSELTVVLADHNQLSGAIPGSLAELSSLTMLDLSGNKFSGEIPSNLNNIHGLVYFNVSGNNLEGEIPPMLGSKFNDSSVFANNHNLCGKPLDRKCEETDSGERNRLIVLIIIIAVGACLLALCCCFYISNLLRWRRRIKAAVSGEKKKSPRTSSGTSQGRSSTDTNGPKLVMFNAKITLAETIEATRQFDEENVLNRTKHGLVFKACYNDGMVLSIRKLQDGSLDENMFRKEAESLGKIRNRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHLDGHVLNWPMRHLIALGIARGIAFLHQSSLIHGDIKPQNVLFDADFEAHLSDFGLDKLTVPNPVEASTSSTASVGTLGYVSPEAVLTGEPTKECDVYSYGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQNGQITELLEPGLFELDPESSEWEEFLLGLKVGLLCTAPDPLDRPTMADIVFMLEGCRVGPDIASSAEPTTQTSPV 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03816 1155 SUPERFAMILY L domain-like 51 378 - -
Spst3g03816 1155 Pfam Protein kinase domain 871 1130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03816 1155 FunFam Inactive leucine-rich repeat receptor-like protein kinase 188 277 - -
Spst3g03816 1155 Pfam Leucine Rich Repeat 650 672 IPR001611 GO:0005515
Spst3g03816 1155 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 644 766 - -
Spst3g03816 1155 ProSitePatterns Serine/Threonine protein kinases active-site signature. 980 992 IPR008271 GO:0004672|GO:0006468
Spst3g03816 1155 Gene3D Ribonuclease Inhibitor 499 774 IPR032675 -
Spst3g03816 1155 SMART LRR_sd22_2 282 309 - -
Spst3g03816 1155 SMART LRR_sd22_2 186 212 - -
Spst3g03816 1155 SMART LRR_sd22_2 600 626 - -
Spst3g03816 1155 SMART LRR_sd22_2 648 671 - -
Spst3g03816 1155 SMART LRR_sd22_2 696 719 - -
Spst3g03816 1155 SMART LRR_sd22_2 456 479 - -
Spst3g03816 1155 SMART LRR_sd22_2 480 506 - -
Spst3g03816 1155 SMART LRR_sd22_2 234 257 - -
Spst3g03816 1155 FunFam Nuclear pore complex protein NUP107 50 187 - -
Spst3g03816 1155 MobiDBLite consensus disorder prediction 814 839 - -
Spst3g03816 1155 Gene3D Phosphorylase Kinase; domain 1 823 935 - -
Spst3g03816 1155 MobiDBLite consensus disorder prediction 818 839 - -
Spst3g03816 1155 Gene3D Ribonuclease Inhibitor 187 307 IPR032675 -
Spst3g03816 1155 SMART LRR_typ_2 552 575 IPR003591 -
Spst3g03816 1155 SMART LRR_typ_2 282 306 IPR003591 -
Spst3g03816 1155 SMART LRR_typ_2 164 188 IPR003591 -
Spst3g03816 1155 SMART LRR_typ_2 456 479 IPR003591 -
Spst3g03816 1155 SMART LRR_typ_2 504 528 IPR003591 -
Spst3g03816 1155 SMART LRR_typ_2 696 720 IPR003591 -
Spst3g03816 1155 SMART LRR_typ_2 360 384 IPR003591 -
Spst3g03816 1155 SMART LRR_typ_2 600 624 IPR003591 -
Spst3g03816 1155 SMART LRR_typ_2 480 503 IPR003591 -
Spst3g03816 1155 SMART LRR_typ_2 648 672 IPR003591 -
Spst3g03816 1155 SMART LRR_typ_2 116 140 IPR003591 -
Spst3g03816 1155 SMART LRR_typ_2 234 258 IPR003591 -
Spst3g03816 1155 SMART LRR_typ_2 432 455 IPR003591 -
Spst3g03816 1155 SMART serkin_6 860 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03816 1155 Gene3D Ribonuclease Inhibitor 308 498 IPR032675 -
Spst3g03816 1155 Gene3D Ribonuclease Inhibitor 102 186 IPR032675 -
Spst3g03816 1155 Gene3D Ribonuclease Inhibitor 44 101 IPR032675 -
Spst3g03816 1155 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 936 1141 - -
Spst3g03816 1155 FunFam Piriformospora indica-insensitive protein 2 521 618 - -
Spst3g03816 1155 SUPERFAMILY L domain-like 532 763 - -
Spst3g03816 1155 SUPERFAMILY L domain-like 357 611 - -
Spst3g03816 1155 Pfam Leucine rich repeat N-terminal domain 53 90 IPR013210 -
Spst3g03816 1155 Pfam Leucine rich repeat 553 613 IPR001611 GO:0005515
Spst3g03816 1155 Pfam Leucine rich repeat 409 469 IPR001611 GO:0005515
Spst3g03816 1155 Pfam Leucine rich repeat 188 247 IPR001611 GO:0005515
Spst3g03816 1155 ProSiteProfiles Protein kinase domain profile. 860 1142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03816 1155 Gene3D Transferase(Phosphotransferase) domain 1 936 1145 - -
Spst3g03816 1155 FunFam Uncharacterized protein 282 498 - -
Spst3g03816 1155 FunFam Putative LRR receptor-like serine/threonine-protein kinase 823 935 - -
Spst3g03816 1155 SUPERFAMILY Protein kinase-like (PK-like) 842 1140 IPR011009 -
Spst3g03816 1155 PANTHER LEUCINE RICH REPEAT KINASE 2 577 1135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03816 Spst-Chr3 88113235 88116977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03816 32 1155 Receptor kinase-like Gene Family AT4G36180 65.405 0.0 1429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Spst3g03816 Pkinase 6.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03816 - - vun:114175753 2028.45