Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03804 ATGGCCATAAGGAAATCCAATAAGCTACCCCAAGCAGAAGTGATCAAGCAAATAGTGAGAAGATGCTCAAGCTTTGGCAAGAAACAGAGCTACAATGAAGAGGGTCTTCCAGAAGATGTGCCAAAAGGGCACTTTGCGGTGTATGTTGGTGAAAACAGGACAAGATATATCGTCCCAATTTCATGGTTGGCTCATCCACAGTTTCAAACTCTTCTCCAAAGAGCAGAGGAGGAGTTTGGCTTCAATCATGACATGGGCCTCACCATCCCATGTGATGAAGTTGTTTTTGAGTTTCTTACATCGATGATTAGATGA 315 0.4317 MAIRKSNKLPQAEVIKQIVRRCSSFGKKQSYNEEGLPEDVPKGHFAVYVGENRTRYIVPISWLAHPQFQTLLQRAEEEFGFNHDMGLTIPCDEVVFEFLTSMIR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03804 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 30 101 IPR003676 GO:0009733
Spst3g03804 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03804 Spst-Chr3 88021514 88021828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03804 37 103 Calmodulin-binding Proteins AT3G43120 50.746 7.87e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03804 K14488 - gmx:100500218 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00085 9 655008 655322 Spst3g03804 3 88021514 88021828 ECH
Spst2g02602 2 25783463 25783777 Spst3g03804 3 88021514 88021828 ECH
Spst3g03804 3 88021514 88021828 Spst3g03804 3 88021514 88021828 ECH