Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03796 ATGGGAATCTGCTTTTCCGCTACCAAGGTCAGTGGATCCAACGGCACCACCGCCAACGCCGCCGCCAATAAAAACCGCAAGCGCTCTGCTAAGCGCAAATCGAAGACGGCCACGGCCAACCCCCAACGGCACAAGGCATGTGCGCGGAACGTGCCGTGCGGGATGCGCACCGATTTCGGTTACGAAAAAGATTTCCAAAAGCGATACACGCTCGGCAAATTGCTCGGACACGGCCAATTCGGTTACACCTACGTCGGAATCCACAAAGCCAATGGCGATCACGTCGCCGTTAAGAGGCTCGAGAAGAGTAAGATGGTTCAGCCTATAGCCGTTGAGGATGTTAAGCGAGAGGTCAAAATATTGAAAGCGCTCACTGGCCACGAGAACGTGGTTCAGTTCTATAATGCTTTTGAGGATGATTCTTACGTGTATATAGTGATGGAGTTATGCGAGGGTGGAGAACTGCTGGATCGGATATTGGCCAAGAAGGACAGCCGTTATACTGAAAAAGATGCAGCGGTGGTTGTAAGGCAGATGCTCAAGGTTGCTGCTGAGTGTCATTTACATGGTTTGGTGCACCGGGACATGAAACCAGAGAATTTTCTTTTTAAATCAACCGAAGAAGATTCACCTTTAAAGGCCACAGATTTTGGTTTGTCGGATTTCATAAAACCTGGAAAGAAGTTTAATGATATTGTTGGCAGTGCTTACTATGTTGCACCTGAAGTGCTAAAACGAAAGTCAGGCCCACAATCAGATGTGTGGAGTATTGGTGTTATTACATATATATTGCTGTGTGGGAGACGCCCATTTTGGGATAAGACTGAGGATGGTATTTTCAAGGAGGTTTTACGGAAGAAGCCTGATTTCAGTCGGAAACCATGGCCAACTATAAGTAATGCTGCCATAGATTTTGTGGAAAAATTACTGGTAAAGGATCCCCAGGCGAGATTAACTGCTGCTCAAGCTCTATCTGCACTCCATGTGCTCTATTTCTCTTCCAAGGCTTCAATATGTTACTCCACCTCTCCAAAGAATAGGTCTGGCATTGGGCAAGTTAATTTGCAAAAGTCAAACTCACATCCATGGGTTAGAGAAGGAGGAGAAGCATTGGAGATTCCTATTGATATATCTGTTCTGAACAACATGCGGCAGTTTGTGAAATATAGTCGATTGAAACAATTTGCATTGAGGGCATTGGCTAGCACAATTAACGAAGAAGAGTTGGCTGATCTAAAAGATCAGTTTGATGCTATAGATGAGGACAAAAATGGTTCTATTAGTTTGGAAGAGATGAGACAGGCTCTTGCAAAAGATCTTCCTTGGAAGTTGAAAGAATCACGTGTACTAGAAATATTGCAAGCGATAGACAGCAACACTGATGGACTTGTGGATTTCAGTGAGTTTGTAGCTGCCACATTACATGTGCGTCAATTGGAGGAAAACTCTGACAAGTGGCAGCAACGGTCACAGGCTGCTTTTGAGAAATTTGACTTAGATAAAAATGGCTATATTACGCCAGAGGAACTTAGAATGGTTGGCTTGAGAGGCTCCATTGATCCTTTGCTCGAGGAAGCCGATATTGACAAAGATGGAAAAATCAGCCTATCAGAGTTTCGTAGACTTCTAAGGAATGCCAGCATAGGTTCTCAAAAGTTTTCAAGCCCAAATATCTCCTCTGTGCTGACAATCTATGAAACTCAGGCTGCATGTGGTATCCTCAGAGCGGGGATTATCTCCACAATGTCACGAGGACTACATCAAGAGGTGTTTGGTAGAGTTTATGTAGACCCTCATGGACTGGATTCAGAGTCAATGGGTCGAGATGGGCCCTCCAAAGAAGCTTTACAAGTTTGGACGGTGGATCCTGACTCGTACAGCCTTAAGGAAGAAGACATGTTTGAAGAAATTGAAGCAGAAGCTAGCCAAGCTAAATATTTCTCATTTCCAGAGGTAGATTTCCACGTGGGACTGAAGTTTGGAAGAGAAAGGGATATTGGGAAGATCTTGCTAAGAAAAAATGCCCATATGGAAGAAATTGCCTTTCGTCTAATCATCTGTCTCATTACCAACCCAACCTTATTGGCTGAAGTCAAAATCAAGTCTTATGATATTCAGTTAAAACTATAG 2130 0.4404 MGICFSATKVSGSNGTTANAAANKNRKRSAKRKSKTATANPQRHKACARNVPCGMRTDFGYEKDFQKRYTLGKLLGHGQFGYTYVGIHKANGDHVAVKRLEKSKMVQPIAVEDVKREVKILKALTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTEEDSPLKATDFGLSDFIKPGKKFNDIVGSAYYVAPEVLKRKSGPQSDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRKKPDFSRKPWPTISNAAIDFVEKLLVKDPQARLTAAQALSALHVLYFSSKASICYSTSPKNRSGIGQVNLQKSNSHPWVREGGEALEIPIDISVLNNMRQFVKYSRLKQFALRALASTINEEELADLKDQFDAIDEDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFSEFVAATLHVRQLEENSDKWQQRSQAAFEKFDLDKNGYITPEELRMVGLRGSIDPLLEEADIDKDGKISLSEFRRLLRNASIGSQKFSSPNISSVLTIYETQAACGILRAGIISTMSRGLHQEVFGRVYVDPHGLDSESMGRDGPSKEALQVWTVDPDSYSLKEEDMFEEIEAEASQAKYFSFPEVDFHVGLKFGRERDIGKILLRKNAHMEEIAFRLIICLITNPTLLAEVKIKSYDIQLKL 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03796 709 SMART efh_1 448 476 IPR002048 GO:0005509
Spst3g03796 709 SMART efh_1 518 546 IPR002048 GO:0005509
Spst3g03796 709 SMART efh_1 411 439 IPR002048 GO:0005509
Spst3g03796 709 SMART efh_1 489 517 IPR002048 GO:0005509
Spst3g03796 709 CDD EFh 411 472 IPR002048 GO:0005509
Spst3g03796 709 PANTHER SERINE/THREONINE-PROTEIN KINASE 49 536 - -
Spst3g03796 709 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Spst3g03796 709 ProSitePatterns EF-hand calcium-binding domain. 527 539 IPR018247 -
Spst3g03796 709 SUPERFAMILY EF-hand 393 544 IPR011992 -
Spst3g03796 709 CDD EFh 491 544 IPR002048 GO:0005509
Spst3g03796 709 ProSitePatterns EF-hand calcium-binding domain. 420 432 IPR018247 -
Spst3g03796 709 Pfam Protein kinase domain 69 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03796 709 Coils Coil 476 496 - -
Spst3g03796 709 FunFam Calcium-dependent protein kinase 28 405 474 - -
Spst3g03796 709 ProSiteProfiles EF-hand calcium-binding domain profile. 485 520 IPR002048 GO:0005509
Spst3g03796 709 Gene3D Phosphorylase Kinase; domain 1 62 154 - -
Spst3g03796 709 MobiDBLite consensus disorder prediction 25 39 - -
Spst3g03796 709 ProSiteProfiles Protein kinase domain profile. 69 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03796 709 ProSitePatterns EF-hand calcium-binding domain. 457 469 IPR018247 -
Spst3g03796 709 ProSiteProfiles EF-hand calcium-binding domain profile. 522 549 IPR002048 GO:0005509
Spst3g03796 709 Gene3D - 371 547 - -
Spst3g03796 709 Pfam EF-hand domain pair 411 473 IPR002048 GO:0005509
Spst3g03796 709 Pfam EF-hand domain pair 491 543 IPR002048 GO:0005509
Spst3g03796 709 SMART serkin_6 69 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03796 709 FunFam CDPK-related kinase 1 62 154 - -
Spst3g03796 709 ProSitePatterns EF-hand calcium-binding domain. 498 510 IPR018247 -
Spst3g03796 709 ProSiteProfiles EF-hand calcium-binding domain profile. 407 442 IPR002048 GO:0005509
Spst3g03796 709 ProSiteProfiles EF-hand calcium-binding domain profile. 444 479 IPR002048 GO:0005509
Spst3g03796 709 Gene3D Transferase(Phosphotransferase) domain 1 155 366 - -
Spst3g03796 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Spst3g03796 709 MobiDBLite consensus disorder prediction 13 45 - -
Spst3g03796 709 CDD STKc_CAMK 68 325 - -
Spst3g03796 709 SUPERFAMILY Protein kinase-like (PK-like) 66 330 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03796 Spst-Chr3 87959933 87969683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03796 1 556 EF-hand Containing Proteins AT2G17890 69.682 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst3g03796 Pkinase 8.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03796 K13412 - gmx:100798941 889.797