Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03794 ATGGAGGCTGAGGAGGTGCAAATCTTCCATGATTCGAATATTCAATTTCAGCCTGAGCCTGTTGTCTCAGTTCTGAATGGGGATCCTGATGTTTCCTCATCTGTTTCAAATGCTGTTAACACTCAGCAGGCAGCTACAAAAAAACCAACCAGGCAGTGGGCTGCGTGGACTCGACAAGAGGAGGAAAGTTTCTTCACTGCATTACGACAAGTTGGGAAGAATTTTGAGAAAATTACTTCACGTGTACAAAGTAAAAACAAGGATCAGGTCAGGCATTATTACTACCGGCTTGTGAGGCGGATGAACAAACTTCTTGGTCCAGGACTATGTTTGGATGCCAAAAACTCCAAAGATACTAATGCTGCAATGCTTCGCTGGTGGTCTTTATTAGAAAAGTATAGCTGCAAGGCCTCCAAGCTTCACCTGAAGCCCCGAAGATTTAAAATATTTTTAGAAGCATTGGAGCACCAACTATTGAAGGACCGAAAGAAGAATGTAAGGAAGCGACCCTTGCAGGGGGGAAATTGTCTTCCTCCTGTGCCTACCACAGTCTCAAATCAAAGTAGAGCATCAGGAAATGATGCCCGTGCTGTTAAACTTGTTCTTGTTGACAGTCAAAATATTCTAAAATTGGGACCTTCAAAATCATCAATGAAGCGCAATATAAACATGGGTGTTAGCCGCAGTAACACTAAAGGAGATTCAAACACCATGAAACCAACAAGGCAACGAAAGAAATCTGGTATGATTTCAACGGCAGCATATAAAAAATGGGAGAAAGCTGCAATTGCTGGTGTTTCTTTAGTTGCCGATGCTGCAGAGCATTTGGAGCGAGCTGCAACTGTTAGAGAGATTGAACAAGACCAGGGGAATCCAGGAGAAAAGTGCTCTGATCCTGCTGATTATGTTCTGCCCTCTTTACCTGTATGTCCACAAAATCAATTTGTTGATAACAGTGTGAATAGTAGTATGAAACTTAAGCTCCAGTTATTCCCAATTGATGAACCTACTCGAAGAGCATTGGAAATAGATAAGCATAATCCACACCTGGAGCTTACACTTAGTACTCGAAAGAAGATATCATCAATTTTGGAACACCTAAACCGCAAATGGGGTCATTCAAGCATAGCAGTTGGAGAATTAATGCTTTTTCCTTATGGTATTCAAAGGGAAAACTTGGTTAATTATCAGAGATGGACCCAGGAATCTACTTTTAATGCAGCTGACATATATGCAATGATTGGAAGTCCACCCATATTTCGTTTAAGGTATGGTTGGTTCTCCAATACTGAACTTGGGTTATTAAATATGCAAGTGCCTGTAGCATCCGGCTCCATGCTCAGGCAGTCGAAAAGTAGTGTGTGCAATTCTAAGGATCAGATTGTGAATTCGGTTTCATTTCCTACACCATCAACTGATTGCAGAATATCCAACCATACTGTTATGTCCTCTTCAACTGATTTGCCTAACACTAGAGACAACACTGCTTACCTGAGTAAAAGCAGTGAGGAATCTCGTTGTCCCACGGCCAACACATTGTGGCATGAAAAAGATGTTAGAAATGGAGCTGTAACTACACAGTTAGAAGACATGGATGAGTTAAAATTAAGCAGTGGAACAGGTCTGTCAGCTGGAGAATGGGCTGACAGCCTTACCAACATTAGTGTGGGGGACCTACTTTCAGGAGTGTCCCAGGATCTCGAAGATGATTGCATCAATCCTCCTATTGCTGAGAGTTGTCACGATGTTCAGCAACTTCCATTTAGTAGTGATTCTTTTGATGCTGCTATTGCTGCTCACATTTCTAGACACCAAGACAAGATGGAACAATCATCGCTGGCATCCCATATGTCTTCCATCTGGGACGCTGAAGAAACTTGTGATGCCTTTTTATTTAGAAAAGATCCTATTCTTCATGTAGATCGTCCTTGTTTGTCTCCAATTGCTTCTTTAGAATCTGAAAAAAAGGTTCCTGAAAGAAGCTTTGATAAATTGGATGAGTTGTCGCCCGAAAGAGAGAGGCTTGTGGATGATTTTGCTCAAACTGACCCTATGCCTATGGACAGCTCCGAGTCTGATGCAGATGTCCAGGATCATTTAGGAAAGGATTTTAGTGCGCTTGCAGATATGTATTGGCCTGATTCGTTGGGACCTTTGGATTTGGATATACCATCATCGACTAAGTACCATAGCGAAGATCTAATTTTTAGTGATAGTCTTAGTGGACTGAATCGCTTGATAGCCAGCAGCCTGGATGCATTTCAGAATTGCTCCTTTTTTGGGCTTGACAAGAAGGAAGCACCATCAACAGTTGAGGCTCGAGAATCTGCCACTCTTTCAGATTTTAAAATTGGAAGTGGTATCTGA 2367 0.4191 MEAEEVQIFHDSNIQFQPEPVVSVLNGDPDVSSSVSNAVNTQQAATKKPTRQWAAWTRQEEESFFTALRQVGKNFEKITSRVQSKNKDQVRHYYYRLVRRMNKLLGPGLCLDAKNSKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKIFLEALEHQLLKDRKKNVRKRPLQGGNCLPPVPTTVSNQSRASGNDARAVKLVLVDSQNILKLGPSKSSMKRNINMGVSRSNTKGDSNTMKPTRQRKKSGMISTAAYKKWEKAAIAGVSLVADAAEHLERAATVREIEQDQGNPGEKCSDPADYVLPSLPVCPQNQFVDNSVNSSMKLKLQLFPIDEPTRRALEIDKHNPHLELTLSTRKKISSILEHLNRKWGHSSIAVGELMLFPYGIQRENLVNYQRWTQESTFNAADIYAMIGSPPIFRLRYGWFSNTELGLLNMQVPVASGSMLRQSKSSVCNSKDQIVNSVSFPTPSTDCRISNHTVMSSSTDLPNTRDNTAYLSKSSEESRCPTANTLWHEKDVRNGAVTTQLEDMDELKLSSGTGLSAGEWADSLTNISVGDLLSGVSQDLEDDCINPPIAESCHDVQQLPFSSDSFDAAIAAHISRHQDKMEQSSLASHMSSIWDAEETCDAFLFRKDPILHVDRPCLSPIASLESEKKVPERSFDKLDELSPERERLVDDFAQTDPMPMDSSESDADVQDHLGKDFSALADMYWPDSLGPLDLDIPSSTKYHSEDLIFSDSLSGLNRLIASSLDAFQNCSFFGLDKKEAPSTVEARESATLSDFKIGSGI 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03794 788 PANTHER CRAMPED PROTEIN 40 761 - -
Spst3g03794 788 Pfam Myb-like DNA-binding domain 55 97 IPR001005 -
Spst3g03794 788 FunFam TSL-kinase interacting protein 1 17 105 - -
Spst3g03794 788 ProSiteProfiles Myb-like domain profile. 48 98 IPR001005 -
Spst3g03794 788 FunFam TSL-kinase interacting protein 1 56 117 - -
Spst3g03794 788 SUPERFAMILY Homeodomain-like 47 102 IPR009057 -
Spst3g03794 788 MobiDBLite consensus disorder prediction 213 249 - -
Spst3g03794 788 MobiDBLite consensus disorder prediction 166 191 - -
Spst3g03794 788 Gene3D - 21 105 - -
Spst3g03794 788 CDD SANT 55 98 IPR001005 -
Spst3g03794 788 ProSiteProfiles SANT domain profile. 56 102 IPR017884 -
Spst3g03794 788 SMART sant 52 100 IPR001005 -
Spst3g03794 788 MobiDBLite consensus disorder prediction 213 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03794 Spst-Chr3 87942472 87949047 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst3g03794 Myb_DNA-binding 5.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03794 - - gmx:100798411 1379.77