Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03781 ATGGGTTCTATTGGAATTGAAAGGTCGGGATCCGAGGTTGTCACCATTGATGTTCATGCAGCCAAGGGTTTGATCCAGACCAGTCATGTTTATCTCGATGTCAGGACGGTGGAAGAGTTTCAGAAAGGGCATGTGGATGCTGCGAAGGTCATTAACATTCCCTACATGTTTAATACACCAGAAGGTAGAGTGAAAAACCCAGAGTTTCTGAAGGAGGTTTCATCAGCTTGCAAGAAAGAAGATCACATCATTGTGGGTTGTCAAAGTGGAGTGAGATCTGTGTATGCTACTACTGATCTTCTGACAGAAGGGTTTAAGGATGTGAGTAACATGGGAGGAGGATATCTTGCCTGGGTTAAAAATGAATTTGCAGTGAAAACACTTTTGGACTTGGTTAAAGATGAAGTTCCAGTGAAAGCACCAGTGGACTTGGTTAAAGATGAAGTTGCAGTAAAAGCACCCTAA 465 0.428 MGSIGIERSGSEVVTIDVHAAKGLIQTSHVYLDVRTVEEFQKGHVDAAKVINIPYMFNTPEGRVKNPEFLKEVSSACKKEDHIIVGCQSGVRSVYATTDLLTEGFKDVSNMGGGYLAWVKNEFAVKTLLDLVKDEVPVKAPVDLVKDEVAVKAP 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03781 154 Gene3D - 6 126 IPR036873 -
Spst3g03781 154 Pfam Rhodanese-like domain 25 120 IPR001763 -
Spst3g03781 154 PANTHER THIOSULFATE SULFURTRANSFERASE 18 7 127 IPR044684 GO:0003824
Spst3g03781 154 SMART rhod_4 16 124 IPR001763 -
Spst3g03781 154 FunFam Thiosulfate sulfurtransferase 16, chloroplastic 3 126 - -
Spst3g03781 154 ProSiteProfiles Rhodanese domain profile. 29 127 IPR001763 -
Spst3g03781 154 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 12 122 IPR036873 -
Spst3g03781 154 CDD RHOD 20 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03781 Spst-Chr3 87842398 87844577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03781 3 127 Sulfurtransferasese or Rhodanese AT5G66170 57.600 6.60e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03781 - K15692 pvu:PHAVU_003G264200g 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03781 3 87842398 87844577 Spst3g03781 3 87842398 87844577 ECH
Spst3g03781 3 87842398 87844577 Spst3g03781 3 87842398 87844577 PCT
Spst2g00962 2 8276424 8278137 Spst3g03781 3 87842398 87844577 PCT