Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03770 ATGCAACCACCAGAGGTTCACCAAGTACAAGTCCAACCTGCTAATCTCCCTTCACAGTTCTACGATCATGATCAAAACTTTTTAATACAACAACCACAAGTTCAACAAGCACAACAAGTTGAACCTACTTATCTCTATGGAGAGTTCTACACTCATGATCAAGATTTCTCAACGCAACAACCCCAAATTCAACAACATGCAAATCTTTATCCTCATGCTCAAAACTTGTCAATGGAACAATCACAACTTCATTCAAGAGATCCAATTATTTCCAGACCAAAAATTAGAGGAAGGGAAGATTTGAATGGAGTAATAGATGGTGGAGAGTGCATTCATACGAATTTGATTGGGACGCAACGCAAACGCCTACCAACCAATGAAACTGTGCCAGCAGTCATGGTCTTTGGAGACTCCATTGTAGATACAGGAAACAACAATTATATCTCCACTCTTGTCAAATGCAATTTCCCTCCATATGGTAGAGATTTTGCTGAAGGAAATCATCCATCTGGGAGGTTCAGCAATGGCTTAGTCCCATCAGATATTATTGCTGCAAAATTTGGAGTCAAGAATTTCTTACCACCTTATCTTGATCCAAGTTTGCAAATTCAAGATCTCCTCACTGGTGTAAGCTTTGCCTCAGGTGGAGCTGGATATGATCCTCTAACAGCTAAATTAGTGTCTGTGATGTCATTATCAGATCAATTAGATATGTTCAAGGACTATATAAAGAAGATAAATGATGCAGTTGGAGAAAACAGAACCCAACTAATAGTGTCTAAGAGCATATACATAGTGTGCATTGGAAGTGATGACATTGCCAATACTTATGCTCAATCACCGTTTAGACGTGTCGATTATGATATTGCTTCGTACACAGACCTAATGGCTTCAGAAGCCTCAAAATTCTTTGAGGCACTGTATGGAATAGGAGCGAGAAGAATTGGAGTATTTGGTTTACCAGCCATAGGATGTGTGCCATCACAAAGAACAGTGGGTGGAGGCTTCGATAGACAATGTGTAGAATTTTCTAATCAAGCAGCAATGCTATTTAACTCTAAACTCTCTTATCAGATGGATGCACTTGGGAAAAAGTTTTCGGATGCTAAACTTGTTTACCTTGATTCTTATCACGGATTGCTAAACATGATTCAAGATCCTGCTAAATATGCCAAATCACAAACAAAATATAGAGAGTTTGCATTTCCTGCTGTTATAGTTTTTGGTGACTCAATCTTCGATACTGGGAACAACGATTATTTTGAAACAATAATGAAGGCAAATTTCAGACCATATGGGAGGGATTTCTTTGGAGGAAAACCCACAGGAAGGTTTAGCAATGGCAGGATCCCTTCAGACTTCAAGAAAGATTGGAGTACTGAGCCTGGCTCCAATAGGATGCGTGCCACTGCTGCGAACAATATGGGGAGGCGAAGAAAGGAATTGCGTAGAATCAGCAAACCAGGCAGCCATGGTCTACAACTCCAAGCTTTCTTCTTCAATGGTGGCTCTCAACAGAAGGCTTCCAAAAGCTAG 1536 0.401 MQPPEVHQVQVQPANLPSQFYDHDQNFLIQQPQVQQAQQVEPTYLYGEFYTHDQDFSTQQPQIQQHANLYPHAQNLSMEQSQLHSRDPIISRPKIRGREDLNGVIDGGECIHTNLIGTQRKRLPTNETVPAVMVFGDSIVDTGNNNYISTLVKCNFPPYGRDFAEGNHPSGRFSNGLVPSDIIAAKFGVKNFLPPYLDPSLQIQDLLTGVSFASGGAGYDPLTAKLVSVMSLSDQLDMFKDYIKKINDAVGENRTQLIVSKSIYIVCIGSDDIANTYAQSPFRRVDYDIASYTDLMASEASKFFEALYGIGARRIGVFGLPAIGCVPSQRTVGGGFDRQCVEFSNQAAMLFNSKLSYQMDALGKKFSDAKLVYLDSYHGLLNMIQDPAKYAKSQTKYREFAFPAVIVFGDSIFDTGNNDYFETIMKANFRPYGRDFFGGKPTGRFSNGRIPSDFKKDWSTEPGSNRMRATAANNMGRRRKELRRISKPGSHGLQLQAFFFNGGSQQKASKS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03770 511 CDD SGNH_plant_lipase_like 130 390 IPR035669 -
Spst3g03770 511 Pfam GDSL-like Lipase/Acylhydrolase 132 392 IPR001087 GO:0016788
Spst3g03770 511 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 132 143 IPR008265 GO:0006629|GO:0016298
Spst3g03770 511 Gene3D SGNH hydrolase 399 475 IPR036514 -
Spst3g03770 511 Gene3D SGNH hydrolase 118 398 IPR036514 -
Spst3g03770 511 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 405 416 IPR008265 GO:0006629|GO:0016298
Spst3g03770 511 PANTHER GDSL ESTERASE/LIPASE EXL3 401 454 - -
Spst3g03770 511 FunFam GDSL esterase/lipase APG 121 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03770 Spst-Chr3 87736516 87751292 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03770 401 453 Pollen Coat Proteome AT1G75910 58.491 2.08e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03770 - - vun:114175459 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03770 3 87736516 87751292 Spst3g03770 3 87736516 87751292 PCT