Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03757 ATGGTATGGATATGTCTTGGCTTATATGCCGTCCCAAGATATGACCAAACTTCACCACCTGCAATACCACAACCACCTGTGAAAAACAGGAGTGGATCTGCACATAAGATGTCGCTGGGATTTATTGCAGGCATTTTCGCAACAATGTTAGTGGCCTTACTCTACTGGCTCTTCAGGAGAAAGGTCATTCCACTTCTTAAGCAGCGTAAGACTTTGACAGGAAAGGAACATAAAGGCTTTGAATGTGATAAAATATCATTAAGGTATTTTGATTTTAAGGAACTAGAGAGAGCAACAGAAAATTTTAGCCAAGATTGCTTGCTGGGTTCTGGTGCATTTGGAAATGTCTACAAAGGAACCTTTGACTTAGAAGAAATTCTAGCCATTAAGAGAGCTCATTCCGAATCATTCTTAAGTGTGGAAGAATTCAGAAATGAAGTCAGGCTCCTTTCAGCTGTAAGGCACAGGAATCTTATTGGTCTGGTTGGATATTGTGAAGAACCAGAACGAGATGGAGCCAAAATACTAGTCTATGAATATGTTCCAAATGGTTCACTGCTTGAGTACATCATGGGAAGCAGAATAAGCCTAACTTGGAAGCAAAGAGTGAAAATAGCAATAGGAGCAGCAAGAGGCATAGCTTATTTGCATGAAGGGGTGAAGCCAAGCATAATCCACCGTGATATCAAACCAAGTAACATCCTATTAGGGGAAGGTTTTGAGGCTAAGGTTTCGGATTTTGGGTTAGTAAAATCAGGGCCAACCGGTGATCAGTCACACGTCAGCAGCCAGATTAAAGGGACACCAGGGTACCTTGACCCTGCCTATTGTTCAAGCTTTCATTTGACCAAATTCAGTGACGTTTATAGCTTTGGTGTTATACTTTTGCAACTTGTTTCAGCTAGACCTGTGGTGGATTCCACTGAAAAACTAAGTAATCAACATATTATTGACTGGGCAAAGCCAAGCATAGAGAAGGGAAGTGTTGAAGAAATTATAGATGCAAATCTACTATGTCAAAGTAAGCCATGCAATATGGCCGTTATGCTGAAGATGGGGCAACTTGGTTTAAGATGTGTGGTTGAAGAACCAAAACATCGCCCAACAATGACTCAGGTGTGTCAAGAACTAGAGCAAGCCCTCCACTCAGCTGATAGCTTCAACAGCAATAAGCAGTCTTTAAAGGAATTCTCTACACCAATTGGCTCATCCCAGCAATCAACGAAGTCAGAGACACGGGGATCAGTTGAATCATATGATTGCTCACAGAGCTTTGTTAGTATTGATGGTGTTGGATTTCAGAAATTCCATGTTGACATGGATAGCTTCTCCTTTAAGAGCACAGACTTAAGGTGCCTAGAAAATAACAGTATCAGTATTAAGATGGATAGAATATAA 1398 0.4092 MVWICLGLYAVPRYDQTSPPAIPQPPVKNRSGSAHKMSLGFIAGIFATMLVALLYWLFRRKVIPLLKQRKTLTGKEHKGFECDKISLRYFDFKELERATENFSQDCLLGSGAFGNVYKGTFDLEEILAIKRAHSESFLSVEEFRNEVRLLSAVRHRNLIGLVGYCEEPERDGAKILVYEYVPNGSLLEYIMGSRISLTWKQRVKIAIGAARGIAYLHEGVKPSIIHRDIKPSNILLGEGFEAKVSDFGLVKSGPTGDQSHVSSQIKGTPGYLDPAYCSSFHLTKFSDVYSFGVILLQLVSARPVVDSTEKLSNQHIIDWAKPSIEKGSVEEIIDANLLCQSKPCNMAVMLKMGQLGLRCVVEEPKHRPTMTQVCQELEQALHSADSFNSNKQSLKEFSTPIGSSQQSTKSETRGSVESYDCSQSFVSIDGVGFQKFHVDMDSFSFKSTDLRCLENNSISIKMDRI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03757 465 SUPERFAMILY Protein kinase-like (PK-like) 84 378 IPR011009 -
Spst3g03757 465 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 420 - -
Spst3g03757 465 FunFam Putative LRR receptor-like serine/threonine-protein kinase 70 180 - -
Spst3g03757 465 CDD STKc_IRAK 108 379 - -
Spst3g03757 465 SMART serkin_6 102 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03757 465 Gene3D Transferase(Phosphotransferase) domain 1 181 402 - -
Spst3g03757 465 Gene3D Phosphorylase Kinase; domain 1 66 180 - -
Spst3g03757 465 ProSitePatterns Protein kinases ATP-binding region signature. 108 130 IPR017441 GO:0005524
Spst3g03757 465 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 181 384 - -
Spst3g03757 465 Pfam Protein kinase domain 105 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03757 465 ProSiteProfiles Protein kinase domain profile. 102 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03757 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03757 Spst-Chr3 87573251 87576051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03757 88 400 Receptor kinase-like Gene Family AT2G21480 43.949 1.45e-78 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Spst3g03757 Pkinase 1.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03757 - - var:108328541 795.808