Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03751 ATGGGTGTGTCGCAAAAATGGTTAAGAATTTTTCGAGGGAGATTCATCAGATCATCCAACAAAGACTTCATTCTACCTCGTACAAGTGTTTGCACTAACGAATGCGAAGAAGCCATACTTAGGAACGAAGACTTCAGTTTCTTCCCTGCACCAGCACCAATCTCTTCAATCACCAAGGAAGATGCTGCGGCCATTAAGATCCAAGCTTATTTCAGGGGACATCTAGCGAGAAGAGCATATAAAGCATTGAAAAGCCTAGTGAAGGTGCAAGCGTTGGCTCGTGGGGTGTGGGTGAGGAAACAATCACGTATAGCAATGCAGTGTATGCACGCACTTGTGCGATTACAAGTCAGGGTTCGTTCAAGCCAGTTACTTGGTAGCTTTCACAACAAGGAACCAACCACTAACTGA 411 0.4501 MGVSQKWLRIFRGRFIRSSNKDFILPRTSVCTNECEEAILRNEDFSFFPAPAPISSITKEDAAAIKIQAYFRGHLARRAYKALKSLVKVQALARGVWVRKQSRIAMQCMHALVRLQVRVRSSQLLGSFHNKEPTTN 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03751 136 SMART iq_5 59 81 IPR000048 GO:0005515
Spst3g03751 136 SMART iq_5 82 103 IPR000048 GO:0005515
Spst3g03751 136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 104 IPR027417 -
Spst3g03751 136 ProSiteProfiles IQ motif profile. 84 111 IPR000048 GO:0005515
Spst3g03751 136 Pfam IQ calmodulin-binding motif 62 81 IPR000048 GO:0005515
Spst3g03751 136 Pfam IQ calmodulin-binding motif 84 101 IPR000048 GO:0005515
Spst3g03751 136 PANTHER IQ-DOMAIN 5-RELATED 52 123 - -
Spst3g03751 136 ProSiteProfiles IQ motif profile. 60 88 IPR000048 GO:0005515
Spst3g03751 136 Gene3D - 58 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03751 Spst-Chr3 87503914 87504487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03751 45 126 IQD Protein Family AT3G51380 65.854 9.70e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03751 - - vun:114179724 223.402