Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03734 ATGTCAATCTCAACTTCACCTCACTCACACCTTCTTCCACAAAACCATAACCACTTTCTCTCCAACCACCGCATCCACATCACCACCACTCTCTCCCTCCCCTCGCCGCGCACTTTCAGGCCTATCAAGTGCGCAGCCACGCCCACCCAGCTGCAGGACCCCCTCCCGACCCAGACCCAGGCCCAAGAGCGCGTCTTCAACTTCGCCGCCGGCCCCGCTACCCTGCCGGAGACCGTTCTCCTTCGCGCCCAGTCCGAGCTCTATCTCTGGCGTGGATCCGGCATGAGCGTCATGGAGATGAGCCACCGCGGCAAGGATTTCACCTCCATCATCGAAAAAGCCGAGTCAGATCTACGCACCCTGTTGCAAATTCCGCCGGAATACTCCGTCTTGTTCCTCCAGGGTGGAGCCACCACCCAGTTCGCCGCCGTGCCGCTCAATCTCTGCGCCCCCGAAGAGCCCGTCGATTACGTCGTCACCGGCTCGTGGAGCGACAAGGCCTTCAAGGAGGCCCAAAAATACTGCAAACCCAGTGTGATTTGGTCTGGGAAATCTGAAAAATACACCAAGATTCCATCTTTACAGGGTTTGGAGCAGAATCCAGATGCCAAATATTTGCACATATGTTCAAATGAGACTATTCACGGGGTTGAGTACAAGGACTACCCAACCCCAACAAACCCCAATGGTGTTCTTGTTGCTGATATGTCTTCAAATTTCTGTTCCAAGCCTGTCGATGTGTCAAAGTTTGGTGTCATCTATGCTGGTGCACAGAAGAATGTGGGGCCCTCTGGTGTGACCATTGTGATAATCAGGAATGATCTGATCGGGCACGCACAGGGTTTGACTCCTGTGATGCTTGATTACAAGATTCATGCTGAGAACAGGTCTCTCTACAACACCCCGCCTTGCTATGGCATTTACATGTGTGGATTGGTGTTTGAGGACCTGTTGGAGCAAGGTGGGTTGGGGGAGGTTGAGAAGAATAATGTGAAGAAAGCTGAGATTTTGTATAATGCAATTGATGCGAGCAACGGGTTTTATAAGTGTCCGGTGGAGAAGTCTGTGAGGTCATTGATGAATGTGCCCTTCACCTTGGAGAAATCGGAGCTGGAGGGTGAGTTTATCAAGGAGGCTGCGAAGGAGAACATGGTTCAGCTAAAGGGGCATAGGTCTGTTGGTGGCATGAGGGCTTCTATTTACAATGCTATGCCTTTGCCTGGGGTTCAGAAATTGGTTGCTTTCATGAAGGACTTCCAAGCCAGGCATGCTTAG 1275 0.52 MSISTSPHSHLLPQNHNHFLSNHRIHITTTLSLPSPRTFRPIKCAATPTQLQDPLPTQTQAQERVFNFAAGPATLPETVLLRAQSELYLWRGSGMSVMEMSHRGKDFTSIIEKAESDLRTLLQIPPEYSVLFLQGGATTQFAAVPLNLCAPEEPVDYVVTGSWSDKAFKEAQKYCKPSVIWSGKSEKYTKIPSLQGLEQNPDAKYLHICSNETIHGVEYKDYPTPTNPNGVLVADMSSNFCSKPVDVSKFGVIYAGAQKNVGPSGVTIVIIRNDLIGHAQGLTPVMLDYKIHAENRSLYNTPPCYGIYMCGLVFEDLLEQGGLGEVEKNNVKKAEILYNAIDASNGFYKCPVEKSVRSLMNVPFTLEKSELEGEFIKEAAKENMVQLKGHRSVGGMRASIYNAMPLPGVQKLVAFMKDFQARHA 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03734 424 CDD PSAT_like 66 420 IPR022278 GO:0004648|GO:0006564
Spst3g03734 424 PANTHER PHOSPHOSERINE AMINOTRANSFERASE 60 424 IPR022278 GO:0004648|GO:0006564
Spst3g03734 424 Gene3D - 78 318 IPR015421 GO:0003824
Spst3g03734 424 Hamap Phosphoserine aminotransferase [serC]. 63 423 IPR022278 GO:0004648|GO:0006564
Spst3g03734 424 Gene3D Aspartate Aminotransferase, domain 1 320 424 IPR015422 GO:0003824
Spst3g03734 424 ProSitePatterns Aminotransferases class-V pyridoxal-phosphate attachment site. 250 269 IPR020578 -
Spst3g03734 424 FunFam Phosphoserine aminotransferase 77 319 - -
Spst3g03734 424 SUPERFAMILY PLP-dependent transferases 63 421 IPR015424 -
Spst3g03734 424 FunFam Phosphoserine aminotransferase 320 424 - -
Spst3g03734 424 PIRSF SerC 59 424 IPR022278 GO:0004648|GO:0006564
Spst3g03734 424 NCBIfam phosphoserine transaminase 65 423 IPR022278 GO:0004648|GO:0006564
Spst3g03734 424 Pfam Aminotransferase class-V 65 412 IPR000192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03734 Spst-Chr3 87376598 87377872 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03734 K00831 - gmx:100795286 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03734 3 87376598 87377872 Spst3g03595 3 85979270 85987425 PCT
Spst3g03734 3 87376598 87377872 Spst3g03734 3 87376598 87377872 PCT