Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03721 ATGTGCACTATTAATGAACCGCCCTCAATATTCAGGCAAGTCTTGTACTTTTTCCAACCCTTTCTAAACTCATCCCAAAATATCACATGGGTCACTCCCCTTTTCCTCCAATTCCTATTTTCCCATCACGGGTTCGATTTGGTTCCTCCGTTTTCAGCTTCACCAAGCACTCACAACAGCGACGGGAAAAGGTTTCTTCCTCTTCCTCCCCCTGATGCCCGAACTCTGAAGTGGCCCAACTTAGTGGTGTTCAGTTTTGAGGACCTGAAATACGCCACAAGGAATTTCAAGTCTGACACATTGATCGGTGAAGGTGGTTTTGGCAGAGTTTACAAGGGATGGTTGGATGAGAACACCCTCACCCCTACCAAACCAGGCTCCGGAATTGTTGTTGCCATCAAAAGGTTGAGCAAGAAAAGCAGCCAAGGGTTTCAAGAGTGGCAGTCAGAAATAAGCCTTTTAGGAAGAGTTTCTCACCCCAACCTGGTGAAGTTATTGGGATACTGCTGGGACGAAGATGAGTTTCTTCTTGTGTACGAGTTCATGCCAAACACACACTTATGGAATCATCTCTTCTTAATAGATCCTGACAAAGAACCCCTTTCTTGGAGTAACCGGTTAAAAATAGCTATTGGTGCAGCTAGGGGATTAGCTTTCTTGCATTCCTCTGAAAATCAAGTCATACACAGAGATTTCAAGTCCATAAATATACTACTCGACGCGAATTACAATGCAAAACTATCAGATTTTGGCCTGGCGAGATTGGGGCCTTCTGAGGGAAATACTCATGTATCTACCAGGATCATGGGCACATATGGTTATGCTGCTCCTGAATACATCGCAACAGGGAACTTGTATGTGAAGAGTGATGTGTATGGATTTGGTGTAGTGCTTCTTGAAATACTGACAGGCATGCGGGCACTTGACCCAGAACGACCTTCAGGACAGCAGATCCTGGTTGAATGGACTAAGCCTTGTCTCTCTTCCAAGAAAAAGTTGAAAACAATTATGGATGGGAGGATAGAGGGTCAATATTCACTCGAGGCTGCATTTGAAGCAGCACAACTTACTCTAAAATGCCTACAATCTGATCCTCATCTACGTCCTTCAATGGAGGAAGTACTCGAGGAATTGGAAGCCATTCAACTTGTCCACAACCCCCAACTCTCACCATCCCCTTTCTCATAG 1188 0.4478 MCTINEPPSIFRQVLYFFQPFLNSSQNITWVTPLFLQFLFSHHGFDLVPPFSASPSTHNSDGKRFLPLPPPDARTLKWPNLVVFSFEDLKYATRNFKSDTLIGEGGFGRVYKGWLDENTLTPTKPGSGIVVAIKRLSKKSSQGFQEWQSEISLLGRVSHPNLVKLLGYCWDEDEFLLVYEFMPNTHLWNHLFLIDPDKEPLSWSNRLKIAIGAARGLAFLHSSENQVIHRDFKSINILLDANYNAKLSDFGLARLGPSEGNTHVSTRIMGTYGYAAPEYIATGNLYVKSDVYGFGVVLLEILTGMRALDPERPSGQQILVEWTKPCLSSKKKLKTIMDGRIEGQYSLEAAFEAAQLTLKCLQSDPHLRPSMEEVLEELEAIQLVHNPQLSPSPFS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03721 395 FunFam Serine/threonine-protein kinase BIK1 70 181 - -
Spst3g03721 395 Gene3D Transferase(Phosphotransferase) domain 1 182 389 - -
Spst3g03721 395 ProSiteProfiles Protein kinase domain profile. 96 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03721 395 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 182 390 - -
Spst3g03721 395 PANTHER OS01G0588500 PROTEIN-RELATED 74 382 - -
Spst3g03721 395 CDD STKc_IRAK 102 381 - -
Spst3g03721 395 Pfam Protein tyrosine and serine/threonine kinase 99 378 IPR001245 GO:0004672|GO:0006468
Spst3g03721 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Spst3g03721 395 Gene3D Phosphorylase Kinase; domain 1 81 181 - -
Spst3g03721 395 ProSitePatterns Protein kinases ATP-binding region signature. 102 134 IPR017441 GO:0005524
Spst3g03721 395 SUPERFAMILY Protein kinase-like (PK-like) 74 391 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03721 Spst-Chr3 87253132 87255509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03721 83 378 Glycoside Hydrolase AT3G07070 47.811 4.05e-94 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst3g03721 PK_Tyr_Ser-Thr 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03721 - - gmx:100794193 501.516