Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03716 ATGTTTGCAGATGACGTGATGTCTAGCGCCAAATGGAGGCGTCGTGTGCGTACAACGGCAAAACCACAGACCTCTGAGCTGCTGAAGTTTCAGTTGGTGGATACGGTGTTTATTGTGGTTCTGCTCATTGGTTCAGAGTTTTTGGTACTTATTGCTTTTCCTGCATTTTCTCAGAAACCTGTTGTTGGGTTTTCTCTTGGCTCTGTTGGGTTTTCTGGTGTAAAGAGAAAGAGTGCTGGTTTACTTCACATATGTTCTGGTAGACTTTTTGACCTTATGGGGGGCTTATTGCACATGTTTGAATTCAATCGGGGTAGGATGGCAAAGAAAGTTCACGCCCATAAGAACAATAACGGTGATCTGGAAACATCTGGAAATGGCATGGAGCTGCAAGTAGAAACCTCTCAGGTTCCCTGTGCAGAAGGAGAATTACCATACTCCAGTCAAGTAGAAGATGGCTGGTCAAAGAAACTCGGTTACTCAAATGTAGATTCGGTGAAAAAATCGAATAAAGAGGATTTATCCAAACAATCAGGCGACAGAAATAATGCACCTAGCCTTGTGGCAAGGTTGATGGGGATAGACACCATGCCATTACCATTAAACACTAAATCTATTGTTTCATTGGATGAAAGAACACATGAAAATATGGAGAGGAAGTTTTCAAAGAAAGAAATGAATGGAAAGGGTTGGTTTGGTAGGGGTTCTTCAAACTTGAATTCTTTTAGCCAAATGGAATTTGATTCATTTTATCAACACATTGATGATAATGATGAAGGGGGACATAGTTTTGGAAAACCAAGGCCAAGGGAACATCCTCAAGAAGAAGAACTCCAACAATTCAAGAAAGAATTTGAATCGTATCAAGCAACAAGGTTTAAGGAGTGGCCCAAGGTTGTTGACATCGGAAGTGGTGCTATGAGAATGCTTTCTCAAGAGAACCCGAGCAAGGAGAAGATGCAACATATTGCAAGTTCAAAGACAGAGAGCCACTCATTTAAAACACAGCTACCAAATGGTGACCTGATGGAGTCAATCTTATCCAAGAAAAATGAATCCTTTCCATCAAGAAGTAAAACACTAAGTAGAGACTTTGAGGAGTCTTTAATGATGAAATCCAGAAGCAGATTATTAGATATATGCGCTTCTCCCACTCAGATAGTTATCTTGAAGCCTGGTTCTGAAAGGATTTGCAATTGCAACCATGAAGACAATTGCATCAGTTTATCAGGCACTTTACATGGGAGAAAAGGTATAGAAGATTTTCTTGAGGAAGTGAGAGAGCGTTTGAAATGTGAACTCCAGGGGATTAGAGCAAGTGGAATTGAGGCACCTTTCAATGAAAAACTATCTGATGCTAAAGAGGTCAGAGAAAGTATGCCTAGAGATGCTGAACCAAATTTATTCCGCTCAGAATCAACGAGATCATGCAAAAGTAAAGTGCAGCTCAATGGACCAAGTTCTCCAGAATTTTTCAACATAGATACCAGGAGATTCTTGTCAGAGAGGCTAAGAAATATTGTGAAAAATGAATTGCATTTGGACGTTCCTGAAGTGGCTTGTTATTTAGACAATAACAGAGTTAGACTAAAGCAAGATACTATAAAGGGTGAAAATGACAAGAGCCAGTGGGAAATTCTGAAAGAGAAAAAAGAATTACAAACATGTTCCTACAGTGGGAAATTAGATGACGATGTATTGTTCCCGAAGGAGTTGTCGCCTAGGAACCTTGAAAGATCCTTGTCCGCTCCTGCATCTGGAACATCATTTGGAAGACTTCTTCTAGAGGACCGCCACATTTTAACCGGTGCCCTTATTCAGAGGAAGCTCGAAGCTGTTGAAGCAAGGCCTGTGGAAGTTAAAAAACAGAAGAAAGATGGATTTAATATTAAAGAAAAACTTTCCAATTTTACATATACTCTTGGTCTAAGAGGTAAACTGTTTGGCAGAAGGATTCAGCCAAAAGTAGAATCAAATGGCAGTAAATATGGTCCAATTTTGAGAGATATCAGGAGTGGACCTACTGTTCTCATGAAATACGGTGACAGACATGAGAACTCCACTGAGTTACCTCCTAGTCCTGCATCTGTGTGCAGTTGTGTTGATGGAGAACATTGGAGACAGACTGGGTATTCAAGTGAAACATCAACTCCAGATGTATCTTCATTAGATGATATTTTTGTTCCCAAGGTTTTTAGAGATATCAGCTCTGGTTTGAATGAGCTAAAGAGACAACTCAGTCAACTTGATTATGAAGGCTTTGATGATTTCACTACAAAGCAGGAGCCTATTGAGTCTGAATTAGTTCAATTGGATGATCCAGCAGAATCTTATGTAAGAGATCTACTTGTTGCCTCTGGTTTGTACTTTGGTTCATGGGATAAATCTATTGGAAACTCAGTTTTTGAAGAAGTGGAAGAATCTCATAGGAAATTGGTCAAGGAGGATGAAAGATCCACAAAAGATCATAACAAGAATGAGTTAGAGCACAAGGTTTTGCTTGATTTGTTAAATGAGGCACTTTCCATTGTTCTTGGACCACCTTTGATATTGTCTAGATTTAGAAGGAAACAAATCAATTCCTCGTTGCAGCCTCCACCATGTGGAAAGGAACTACTGAAGTTAGTATGGGACATTGTCAGTGTTTCTTTACATCCAACGTCTAACACAACTCTTTATTCACTTGACAGTTTGGTGGCACTAGATCTAGGATCTATTTCCTGGTCTGGACTAACAAATGATGAGATTGATACATTGGAAAGAGAGATGGCATGTACAATCACTAATGATTTGGTTGAAGAATTCACAAAGGATATGCTCTTACAGGTGACATGTCCTAAGGATGGAGTTGATGTGTCTGAAACTGTTGACTAG 2874 0.3963 MFADDVMSSAKWRRRVRTTAKPQTSELLKFQLVDTVFIVVLLIGSEFLVLIAFPAFSQKPVVGFSLGSVGFSGVKRKSAGLLHICSGRLFDLMGGLLHMFEFNRGRMAKKVHAHKNNNGDLETSGNGMELQVETSQVPCAEGELPYSSQVEDGWSKKLGYSNVDSVKKSNKEDLSKQSGDRNNAPSLVARLMGIDTMPLPLNTKSIVSLDERTHENMERKFSKKEMNGKGWFGRGSSNLNSFSQMEFDSFYQHIDDNDEGGHSFGKPRPREHPQEEELQQFKKEFESYQATRFKEWPKVVDIGSGAMRMLSQENPSKEKMQHIASSKTESHSFKTQLPNGDLMESILSKKNESFPSRSKTLSRDFEESLMMKSRSRLLDICASPTQIVILKPGSERICNCNHEDNCISLSGTLHGRKGIEDFLEEVRERLKCELQGIRASGIEAPFNEKLSDAKEVRESMPRDAEPNLFRSESTRSCKSKVQLNGPSSPEFFNIDTRRFLSERLRNIVKNELHLDVPEVACYLDNNRVRLKQDTIKGENDKSQWEILKEKKELQTCSYSGKLDDDVLFPKELSPRNLERSLSAPASGTSFGRLLLEDRHILTGALIQRKLEAVEARPVEVKKQKKDGFNIKEKLSNFTYTLGLRGKLFGRRIQPKVESNGSKYGPILRDIRSGPTVLMKYGDRHENSTELPPSPASVCSCVDGEHWRQTGYSSETSTPDVSSLDDIFVPKVFRDISSGLNELKRQLSQLDYEGFDDFTTKQEPIESELVQLDDPAESYVRDLLVASGLYFGSWDKSIGNSVFEEVEESHRKLVKEDERSTKDHNKNELEHKVLLDLLNEALSIVLGPPLILSRFRRKQINSSLQPPPCGKELLKLVWDIVSVSLHPTSNTTLYSLDSLVALDLGSISWSGLTNDEIDTLEREMACTITNDLVEEFTKDMLLQVTCPKDGVDVSETVD 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03716 957 MobiDBLite consensus disorder prediction 255 276 - -
Spst3g03716 957 Pfam Domain of unknown function (DUF4378) 777 934 IPR025486 -
Spst3g03716 957 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 93 940 - -
Spst3g03716 957 Pfam DUF761-associated sequence motif 184 198 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03716 Spst-Chr3 87184073 87194084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03716 166 943 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 36.874 2.01e-128 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03716 - - gmx:100810825 1358.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03716 3 87184073 87194084 Spst3g03716 3 87184073 87194084 ECH
Spst3g03716 3 87184073 87194084 Spst3g03716 3 87184073 87194084 PCT