Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03712 ATGTCGTGTTCTTCTTCATCTGGGTCTGAAGAGGATGATGAGGGGTTCGACTCCTACCGGAAAGGAGGGTACCACGCCGTCAGAGTCGGCGATCAGTTCGCCGGAGGCAGGTACATAGCGCAGAGGAAGCTTGGTTGGGGTCAGTTTTCGACAGTTTGGCTTGCCTATGATACTTCAAAATCTGCGTATGTTGCACTCAAGATCCAGAAAAGTGCAGCTCAATTTGTTCAAGCCGCCCTTCATGAAATTGATGTTCTTGCATCCATTTCTGATGGTGTTGATGTGAATTCAAAATGTGTCGTCCAATTGATTGACCACTTTAAGCACGCAGGTCCTAATGGTCAGCACCTTTGCATGGTGCTTGAGTTTCTTGGGGATAGCTTGCTTCGTCTAATCAAATATAGCCGGTACAAAGGCCTTCCGTTGATTAAAGTTAAGGAGATTTGCCGATGCATTTTAATTGGTTTGGATTATTTGCATAGAGAACATGGTATTATCCATACTGACCTAAAACCAGAAAATGTTCTTTTGATTTCTACCATTGATCCTGCCAAAGACCCCGTTAGATCTGGACTCAGCCCAATATTAGAGAGGCCAGAGGGAAGCATAAATGGTGGAGTTACTAGTCTTATAGAGAAAAAGTTGAAAAGAAGAGCTAGGAGGGCAGTTGCTAAAATCTCTGGAAGAACTACTTCAATAGGAGGAACTGAAGCTCCAAAGTCTGCGAGAAATCTTGATGGGATTGATGTGAGATGCAAGGTGGTAGATTTTGGGAATGCTTGTTGGGCTGATAAGCAGTTTGCAGAAGAAATTCAGACAAGACAGTACAGAGCTCCTGAAGTAATATTGCAGGCTGGCTATTCCTTCTCCGTTGACATGTGGTCTTTCGCTTGTATTGCTTTTGAGCTTGCCACTGGTGATATGTTATTTACGCCCAAGGTTGGACAAGGTTTTAGTGAGGATGAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCTCGGAAGGTTGCTATTGCTGGAGCAAAATCCAAAGATTTCTTTGACAGACATGGGGATCTGAAAAGAATTCGAAGACTAAAGTTTTGGCCGCTAAGCAAATTGTTGATTGATAGATATAAATTTTCAGAGAGTGATGCTCAAGAGTTTTCACAGTTTCTTTTACCACTTCTGGACTTCTCACCGGAGAAGCGGCCAACAGCACAGCAGTCCCTGCAACATCCATGGCTCCAGGGCATAGACTCTGCACAAAATAAAAAGAGAAATGAATCGAGTGTGGAGAACGTGGGTGTTGGGATGAGCAACCTTAAAATGAAGGTGGGAAAGTGA 1335 0.4397 MSCSSSSGSEEDDEGFDSYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAYDTSKSAYVALKIQKSAAQFVQAALHEIDVLASISDGVDVNSKCVVQLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLPLIKVKEICRCILIGLDYLHREHGIIHTDLKPENVLLISTIDPAKDPVRSGLSPILERPEGSINGGVTSLIEKKLKRRARRAVAKISGRTTSIGGTEAPKSARNLDGIDVRCKVVDFGNACWADKQFAEEIQTRQYRAPEVILQAGYSFSVDMWSFACIAFELATGDMLFTPKVGQGFSEDEDHLALMMELLGKMPRKVAIAGAKSKDFFDRHGDLKRIRRLKFWPLSKLLIDRYKFSESDAQEFSQFLLPLLDFSPEKRPTAQQSLQHPWLQGIDSAQNKKRNESSVENVGVGMSNLKMKVGK 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03712 444 SUPERFAMILY Protein kinase-like (PK-like) 32 417 IPR011009 -
Spst3g03712 444 Gene3D Transferase(Phosphotransferase) domain 1 92 412 - -
Spst3g03712 444 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Spst3g03712 444 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 238 424 - -
Spst3g03712 444 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Spst3g03712 444 SMART serkin_6 38 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03712 444 FunFam Protein kinase superfamily protein 24 123 - -
Spst3g03712 444 ProSiteProfiles Protein kinase domain profile. 38 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03712 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Spst3g03712 444 Pfam Protein kinase domain 251 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03712 444 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03712 444 CDD STKc_SRPK 27 412 - -
Spst3g03712 444 FunFam Serine/threonine-protein kinase SRPK 117 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03712 Spst-Chr3 87164165 87167401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03712 4 415 EF-hand Containing Proteins AT5G22840 52.361 3.34e-171 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Spst3g03712 Pkinase 9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03712 K08832 - gmx:100811724 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01007 2 8708104 8715829 Spst3g03712 3 87164165 87167401 PCT