Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03709 ATGAAGTTTTCTCCTTTTCCCATTTCCTTCCTTGTTGCCTTGCTAATTGCCTTCTGCTTCCTCCAAGCCTCGTCAACAACGCTTCCCAAACATCACAAAAATGAAGAACACGACATGCACAGTGGGCTTCATCGACCATTTTCACGCTCCCTTCTCTCTCTTCCACCGAAGGTTGCAACTACGGCACTGGTTGTGACCCTAGATGGGACTATGTATTTGTTGGACAAATCTCCTGGTTCCATGAAGGTGATATGGTCATTCTCGACAGGATCGCCCATCTATCAATCGTATAGAGCTCCAATGAAAAAGGATAATGGTAAAGAAAATGCATCTGCAGCACTAATGAGTGGGTTCATGGAATGTGGGGATGACTGGTCATTGTACATGCACGACAGACACTTTGGTAAAATGAGAATCTCAGAATCCATTGCAGAATATGTAGCTCGGACACCCACCTTTTCAGATGATGGAGCAGTGACACTTGGATCCAAAAGAAGCACTTTGTTTGAAGTTGATGCTAAAACTGGATCAATCATTCAAATCCATGCTATTTCTGATTTTTTTAATGCTTCTGCACCAATGAGTGATGGGAGGCAAAGTGTTACGAATAACCTCAACATAAAGAATGGGGATCTTGCTGATCCTGTGAAACTAAATTCACCACAGCTGCTGCTTAAGATTTTTAGGACAGATTATTCTCTTCAATCTGTTGGTCCTAGCTCAGGAATAGTTTTGTGGACAATGGCAGTAGCTGAATTTGAGGCTTTATTATTATGCCAGCATCCCTCTTCTGATGTAGAGGATGAGTATACTCCTGAGAGTGGCCTCAATTTTACAATGCCATACCCATGTCAAGATATACGACAAGTCTTTCGCCTGAAAAAGAATTTGCTATTTGAACCTTTACTAACTGAAAGATTACTTTGGGATTATCATGAAAATGATATGCTCTCAATACCCTACTCAACTCTAATGCTTCCTTTGCAGTCAAATATTGATGGATTATTCAATGGTGATGATGATAATATGATGCTCCATCAACCTCTCACAGAGATCACTACACCAAGGGAAGTTTATCTGAACAGGACAAGTGAATGGCCAACTCCATTACCTCTTGTATTGTTTACCATCTTTCTTTTGGCATTTTCACTCATCTATCCTCTAGTGATTAGGGATCAAGATACACTGAAGGACCAAAATAGCAAGTCTGAACTAGAAAGTTCACCTGCTAAGAAAAAGAAAACACGTAAATTTGGAAGGAAAAATGGCACTATTGATAAAAGAGATAATCACCTGTCTTCAGAGAATGAGAATGTTCTGATGCGGAAGGATAATGGTGGAGAAGTATGGAAGCACTTTAATCATGCAAATGAAAATGTTGATGGACGAAGGATTGGTAAATTATTTGTTTCAAACGAAGAGATTGCTAAGGGAAGCAATGGTACTGTTGTGCTTGAGGGAATATATGAAGGTCGAGCAGTTGCTATTAAACGTCTTGTTAAGGCTCATCATGACATAGCTTATAAAGAAATCCAAAACCTCATCGTGTCTGATTGTCATCCAAATATTGTCCGATGGCATGGTGTGGAGTATGATAACGATTTTGTTTATCTTGCTTTGCAACGCTGTACATGCAATTTAAATGATTTGATTCAAATTTATTCAGATATATCAGTAAACCCCACCTTTAGGAAGGACCAAGGTATTGGATGTTTGATTAAGTCTCAAATAGAGATGGGGAATGATAGTACAGAGTTTCTTTGGAAGGTAAACGGCTATCCATCTCCTCTATTACTAAAACTGATGAGATCTATGATAGGCTTTGGTAGTTTGGATTTTGGCCAAGAGACCATTGCTGCAACTAAGGATAGAAAACTACAAAAGAAAATGGTAGATAATGAATGTGGGGACATTGTTTCCGGGGTCATTCATTTGCATGAATTGGGTATAATACATCGAGATTTGAAACCACAAAATGTTCTAATAATCAAAGAAAGATCCTTATGTGCAAAACTTTCTGATATGGGGATTAGCAAATGCCTTCTTGAAAATATGTCTTCTTTGGGTAATAATGCTACTGGTGCTTGTGTTGCATATTGTTTCTCCAACATCTTTGCATCCTCGGATAGGGGAATGCCTTTTTGTGTTACGTTGTCTCTGGTTGGAGGTGGTCTTTTTATGGTAGTCAAGAGGTGCTTTTCACCTCTTAAAGTTGAAGGCACTTGGGGAGGCTATCTAGGGGTTACTAAATTGAAGGTTAGGTTTACTTGCTTAATTGCAGGTGGTGGTAGTTCAGGTTGGCAAGCACCAGAACAGCTTGTTCAAGGACGTCAAACACGGGCAGTAGATATATTTAGTTTAGGTTGTGTCCTCTTTTTTTGCATTACCGGGGGAAGACATCCATTTGGAGAACGTATTGAACGGGATATCAATATTTTGAAAAATCAAATGGATCTTTTCTTTGTGGAGTTCATTCCTGAAGCCAAAGATCTCATCAGTCGATTATTAAACCCTTACGCTGATCTAAGTTACGTTAAAAAAATTGGGGGTGAAGGTGCTTTTGCTTGCATGCACATGCATGACAAGGTTCAGTCAGTACATAGGAATTCTTATCATCAGGCAGTTATAATGAAGGAATGGCCAAAGGCAACTGAAGTATTGTACCATCCTTTTTTCTGGAGTTCTGAGATGCGACTTTCGTTTTTGCGTGACACCAGTGACAGGGTGGAGTTGGAAAATAGAGAGACTAATTCTGATCTTTTGGTGACATTAGAAAGCGTTGCCACAGTGGCCTTGGGTGGAAAATGGGATGAAAGGATGGAACCAGCTTTCATTGCTAATATCGGTCACTATCGGCGGTATAATTTTAACAGTGTTCGAGACCTGTTGCGAGTTATGAGAAACAAACTAAATCATTACAGAGAATTGCCTCGAGGAATTCAGATGACATACTGTGTGTTTGTGATGATTAAGAAGTGCCATAGTGCTAGATCTTATGGGCCTGCCTTTGCCTTTACATTTGTTCTTTACCTTGATGTGCTTGACTAG 3048 0.3967 MKFSPFPISFLVALLIAFCFLQASSTTLPKHHKNEEHDMHSGLHRPFSRSLLSLPPKVATTALVVTLDGTMYLLDKSPGSMKVIWSFSTGSPIYQSYRAPMKKDNGKENASAALMSGFMECGDDWSLYMHDRHFGKMRISESIAEYVARTPTFSDDGAVTLGSKRSTLFEVDAKTGSIIQIHAISDFFNASAPMSDGRQSVTNNLNIKNGDLADPVKLNSPQLLLKIFRTDYSLQSVGPSSGIVLWTMAVAEFEALLLCQHPSSDVEDEYTPESGLNFTMPYPCQDIRQVFRLKKNLLFEPLLTERLLWDYHENDMLSIPYSTLMLPLQSNIDGLFNGDDDNMMLHQPLTEITTPREVYLNRTSEWPTPLPLVLFTIFLLAFSLIYPLVIRDQDTLKDQNSKSELESSPAKKKKTRKFGRKNGTIDKRDNHLSSENENVLMRKDNGGEVWKHFNHANENVDGRRIGKLFVSNEEIAKGSNGTVVLEGIYEGRAVAIKRLVKAHHDIAYKEIQNLIVSDCHPNIVRWHGVEYDNDFVYLALQRCTCNLNDLIQIYSDISVNPTFRKDQGIGCLIKSQIEMGNDSTEFLWKVNGYPSPLLLKLMRSMIGFGSLDFGQETIAATKDRKLQKKMVDNECGDIVSGVIHLHELGIIHRDLKPQNVLIIKERSLCAKLSDMGISKCLLENMSSLGNNATGACVAYCFSNIFASSDRGMPFCVTLSLVGGGLFMVVKRCFSPLKVEGTWGGYLGVTKLKVRFTCLIAGGGSSGWQAPEQLVQGRQTRAVDIFSLGCVLFFCITGGRHPFGERIERDINILKNQMDLFFVEFIPEAKDLISRLLNPYADLSYVKKIGGEGAFACMHMHDKVQSVHRNSYHQAVIMKEWPKATEVLYHPFFWSSEMRLSFLRDTSDRVELENRETNSDLLVTLESVATVALGGKWDERMEPAFIANIGHYRRYNFNSVRDLLRVMRNKLNHYRELPRGIQMTYCVFVMIKKCHSARSYGPAFAFTFVLYLDVLD 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03709 1015 Pfam Ribonuclease 2-5A 898 983 IPR010513 GO:0004540|GO:0006397
Spst3g03709 1015 ProSiteProfiles KEN domain profile. 895 1015 IPR010513 GO:0004540|GO:0006397
Spst3g03709 1015 MobiDBLite consensus disorder prediction 398 412 - -
Spst3g03709 1015 PANTHER IRE1-RELATED 755 980 IPR045133 GO:0004521|GO:0004674|GO:0030968
Spst3g03709 1015 Gene3D Transferase(Phosphotransferase) domain 1 613 844 - -
Spst3g03709 1015 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 28 204 IPR011047 -
Spst3g03709 1015 MobiDBLite consensus disorder prediction 398 436 - -
Spst3g03709 1015 Gene3D Transferase(Phosphotransferase) domain 1 436 569 - -
Spst3g03709 1015 SMART serkin_6 469 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03709 1015 MobiDBLite consensus disorder prediction 422 436 - -
Spst3g03709 1015 Pfam Protein tyrosine and serine/threonine kinase 472 685 IPR001245 GO:0004672|GO:0006468
Spst3g03709 1015 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 461 541 - -
Spst3g03709 1015 Gene3D - 43 257 IPR015943 GO:0005515
Spst3g03709 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Spst3g03709 1015 Gene3D KEN domain 895 986 IPR038357 -
Spst3g03709 1015 ProSiteProfiles Protein kinase domain profile. 469 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g03709 1015 SUPERFAMILY Protein kinase-like (PK-like) 455 838 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03709 Spst-Chr3 87135712 87145379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03709 624 681 Core Cell Cycle Gene Families AT2G38620 37.931 6.51e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Spst3g03709 PK_Tyr_Ser-Thr 7.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03709 K08852 - gmx:100788389 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01012 2 8759014 8769643 Spst3g03709 3 87135712 87145379 PCT