Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03707 ATGGTTGACGGAGAAATGCGCTCCGACGAGTTTCATGAGGTGGCAATGGTTGTGTACTGGATATTTGGCGGGCCGACGGAGGACGAATACATTGATAAAATTATTTCAGACAAAAAATCTTTTCAGGATGAAAGCAGAGGCATCAAAGCTGATGTCTTTTATTTGATCTCTGGTGCGTGGAAAACATCATTGGAACGCCTTTTCCTTTGGATTGGAGGATCCCGTCCATCACAGCTTCAAAATTTCGCAGAGTTTGTAAAGAAAACTTTATTTGCAACAAAAATGCCAAAGCTTCCAGCTGCTGCCGGTCTTCTTGCATGGTTTGGAGTTCTGCTTGCAACTGTTGGTTTGGTTATGTTTTGCAAGTGTAGCAGTTTTGAGCTACAATATGAATATAATGGTTATGTGAAACAAGCTCTGTGA 423 0.4161 MVDGEMRSDEFHEVAMVVYWIFGGPTEDEYIDKIISDKKSFQDESRGIKADVFYLISGAWKTSLERLFLWIGGSRPSQLQNFAEFVKKTLFATKMPKLPAAAGLLAWFGVLLATVGLVMFCKCSSFELQYEYNGYVKQAL 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03707 140 PANTHER TRANSCRIPTION FACTOR TGA9 40 81 - -
Spst3g03707 140 Pfam Seed dormancy control 31 81 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03707 Spst-Chr3 87120034 87122918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03707 41 81 Calmodulin-binding Proteins AT1G77920 68.293 3.91e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03707 K14431 - gmx:100526976 67.781